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Description
I am trying to install smoove onto a computing cluster.
Note: We do not have access to Docker, and it seems I lack the sudo permissions required to run the container using apptainer, so that option is out. Conda is also a bust since we do not have mamba on the cluster, and when I try to install with bioconda, it pulls an older version of lumpy that doesn't have lumpy_filter (and trying to remove it and then manually install it while specifying the newer version results in a failure...)
So far, I have successfully downloaded the file located at [https://github.com/brentp/smoove/archive/refs/tags/v0.2.8.zip] , and then unzipped it. But I am unfamiliar with how to proceed from this point since I see no make files (and naively trying to run make doesn't work), and trying to call ./smoove within the folder also fails, so clearly I am missing some sort of step at this point.
Any instructions you can provide would be greatly appreciated, thanks in advance!