-
- In [BioImage.IO](https://bioimage.io/), click on `+Upload` and follow the steps:
-
- 1. Log in to Zenodo and give access to the BioEngine application. You will see an automatic message once you are logged in. If not, refresh the page.
- This step needs to be done only for the first time you upload a model.
- 2. Upload your model RDF.
-
- 
-
- 3. Complete the missing fields.
-
- 
-
- 
-
- 4. A [pull request (PR)](https://github.com/bioimage-io/collection-bioimage-io/pulls/bioimageiobot) is generated (this process may take some minutes). In the PR, the model is tested by a Continuous Integration (CI) workflow for its technical correctness. and reviewed by a maintainer from the BioImage.IO team. This PR is aimed for further discussions between model contributors and the BioImage.IO team.
- 5. Once the model passes all checks and has the approval of a maintainer, it will be added to the BioImage.IO collection and displayed in the webpage (this process may take some minutes).
-
-
-## How to get most of your model documentation
-### Model naming
-
-Models are expected to be used by life-scientists, thus, it is expected that the naming is human readable but also informative enough regarding the final application and the biological tissue being analysed. Example:
-
- **Name:** `Neuron Segmentation in EM (Membrane Prediction)`, `B. Sutilist bacteria segmentation - Widefield microscopy - 2D UNet`
-
-
-### Model Tags
-
-The tags in the model RDF are used to search for each model in the BioImage Model Zoo. The more informative tags you write, the easier it will be for a potential user to find your model. Example:
-
- **My model description**: An encoder-decoder trained for denoising of point-scanning super-resolution microsocpy images of HeLa cells microtubules
-
- **Tags**: `denoising`, `PSSR`, `microtubules`, `encoder-decoder`, `deblurring`, `fluorescence`, `2D`, `HeLa cells`, `deepimagej`, `ilastik`, `image restoration`, `trained-model` etc.
-
-### Model links
-The BioImage Model Zoo is a software webpage. Each model is displayed with an interactive card that can have datasets, notebooks, applications, consumer-software or test-run buttons linked. Example:
-
- **Links**: `imjoy/BioImageIO-Packager`, `ilastik/ilastik`, `deepimagej/deepimagej`, `zero/dataset_fnet_3d_zerocostdl4mic` etc.
-
-### Representative Covers
-
-You can include different cover images that represent the analysed tissue, imaging modality, image processing task and the performance of the model. This image will be used in the model card to guide the users through the model search.
-
-
-## Considerations for the model description file (format_version>=0.3.0)
-
-When following the BioImage.IO model RDF specification provided at https://github.com/bioimage-io/spec-bioimage-io, it is important that you pay special attention to the following:
-* Choose test input image(s) and generate the respective test output tensor(s). This enables our scripts to test your model for technical correctness and to test which [consumer software](https://bioimage.io/docs/#/consumer_software/model_runner) can process it.
-* Pre-processing and post-processing should be always described. You can check which [preprocessing](https://github.com/bioimage-io/spec-bioimage-io/blob/gh-pages/preprocessing_spec_latest.md) and [postprocessing](https://github.com/bioimage-io/spec-bioimage-io/blob/gh-pages/postprocessing_spec_latest.md) functions are supported at the moment and open an [issue here](https://github.com/bioimage-io/spec-bioimage-io/issues) if you are missing a specific operation.
-* Do not forget to include any additional files needed for the correct execution of the model during the upload process.
diff --git a/docs/deprecated/contribute_models/contribute.md b/docs/deprecated/contribute_models/contribute.md
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-# Contribute to BioImage.IO
-
-You are welcome to submit your **models**, **datasest**, **applicaitons** and Jupyter **notebooks** to BioImage.IO.
-
-To add an resource item to BioImage.IO, you need to provide a set of basic information about the resouce, including name, description, authors etc. and we will generate a resource card to display in the website.
-
-For [community partners](https://github.com/bioimage-io/bioimage.io/blob/master/docs/join-partners.md), you can add models directly to the linked repository. If you are not part of the community partners, you can follow the instructions below to submit resource items (models, datasets etc.) to BioImage.IO.
-
-## Submit to BioImage.IO
-* Step 1, prepare a [`Resource Description File`](/bioimageio_rdf_spec)(RDF) and complete at least the mandatory fields and ideally also the recommended fields for different types of resource.
-
-* Step 2, save the RDF file in one of the public git hosting website, it is recommended to store the RDF file in your project git repository on Github/Gitlab/Bitbucket (make sure it's a public repo). Alternatively, you can post it on [Gist](https://gist.github.com/), copy the the **raw** url to the actual file content.
-
-* Step 3, post the url to the comment box below (if you don't see it, click [here](https://github.com/bioimage-io/bioimage-io-models/issues/26)). And the admin team will check and verify the format and incooperate to BioImage.IO if the submitted file is qualified.
-
diff --git a/docs/deprecated/contribute_models/contribute_zenodo.md b/docs/deprecated/contribute_models/contribute_zenodo.md
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-# Uploading a Model to Zenodo for BioImage Model Zoo
-
-**Note:** This tutorial provides a temporary solution for uploading models to the BioImage Model Zoo via Zenodo while the upload feature on the BioImage.IO website is being fixed.
-
-## Purpose
-This tutorial will guide you through the process of uploading a model to the BioImage Model Zoo community on Zenodo. The BioImage Model Zoo project aims to collect and share bioimage analysis models, and your contribution is valuable. Follow the steps below to upload your model.
-
-## Uploading a model
-
-1. Open your web browser and navigate to the Zenodo website at [https://zenodo.org/](https://zenodo.org). You need to create a Zenodo account if you do not have one.
-
- 
-
-2. On the right, close to your username, click the "New upload" button to begin the model upload process. Make sure that the repository is set as public.
-The files in the BioImage.IO zip have to be uploaded one-by-one (See the example in the image below). Note that you can drag & drop all together at once.
-
- 
-
-3. Add `bioimage.io` on Keywords and subjects. This is crucial for us to identify your submission.
-
- 
-
-4. Follow the on-screen instructions to provide the required information about your model. Make sure to include a clear description, relevant tags, and any necessary documentation. See [this documentation](contribute_models/README.md) for more details on the required files and information.
-
-5. Once finished, click on Submit.
-
-6. Your model will be proposed as a new contribution to the BioImage Model Zoo automatically. If the model passes all the tests, it will be automatically displayed in the Zoo. If the model does not pass the test, the GitHub users indicated in `maintainers` in the `rdf.yaml` file will be noitified through GitHub. This process can take 12-24h.
-
-
-## Conclusion
-You've successfully uploaded your model to the BioImage Model Zoo community on Zenodo. Thank you for your contribution to the BioImage Model Zoo project. Remember that this is a temporary solution while the upload feature on the BioImage.IO website is being fixed. We appreciate your patience and support!
diff --git a/docs/deprecated/contribute_models/dummy_model_folder.png b/docs/deprecated/contribute_models/dummy_model_folder.png
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