Skip to content

Commit 47cc2a3

Browse files
committed
[skip ci] update readme + rulegraph
1 parent 0fa5e8a commit 47cc2a3

File tree

2 files changed

+2
-2
lines changed

2 files changed

+2
-2
lines changed

README.md

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -12,7 +12,7 @@ Importantly, Qadabra focuses on feature *ranks* rather than FDR corrected p-valu
1212
Qadabra requires both [Snakemake](https://snakemake.readthedocs.io/en/stable/) and [Snakedeploy](https://snakedeploy.readthedocs.io/en/latest/) to be installed.
1313

1414
```
15-
snakedeploy deploy-workflow https://github.com/gibsramen/qadabra qadabra_dir --tag v0.1.1
15+
snakedeploy deploy-workflow https://github.com/gibsramen/qadabra qadabra_dir --tag v0.1.2
1616
```
1717

1818
This will download the workflow to your local machine.
@@ -74,4 +74,4 @@ We also generated interactive plots to help compare the ranks of different micro
7474
`figures/pca.svg` generates a PCA plot of all the microbes, showing the concordance and discordance of results as well as the contribution of the tools.
7575
You can use the `figures/rank_comparisons.html` webpage to dynamically explore the relationship between pairs of tools.
7676
The `upset` subdirectory contains [UpSet](https://doi.org/10.1109%2FTVCG.2014.2346248) plots comparing the features from each tool.
77-
Finally, the `roc` subdirectory contains ROC plots of all tools at each percentile of features.
77+
Finally, the `roc` and `pr` subdirectories contain ROC and PR (respectively) plots of all tools at each percentile of features.

imgs/rule_graph.png

3.14 KB
Loading

0 commit comments

Comments
 (0)