Skip to content

How to launch interactive tool #618

@amufaamo

Description

@amufaamo

I could use docker galaxy by the command

docker run -d -p 8080:80 -p 8021:21 -p 4002:4002
--privileged=true
-v /home/user/galaxy_storage/:/export/
-e "GALAXY_DOMAIN=your.domain.com"
-e "GALAXY_DESTINATIONS_DEFAULT=slurm_cluster_docker"
quay.io/bgruening/galaxy

I clicked Interactive tool > Interactive Jupyter Lab Notebook, but I got error.

"cp: cannot create regular file '/home/jovyan/.ipython/profile_default/startup/00-load.py': No such file or directory"

How can I use jupyter or R studio on the galaxy?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions