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lines changed Original file line number Diff line number Diff line change @@ -5,8 +5,6 @@ of Center for Epigenomics of the Mouse Brain Atlas (CEMBA), which is now publish
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* Change Log
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1. 2025-03-22: add zenodo link to store
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- subclass-specific CREs using SnapATAC2 differential anaysis.
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- - count_peakBysubclass.csv, pseudobulk-level count data for all the peaks.
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- - cpm_peakBysubclass.csv, pseudobulk-level Count-Per-Million (CPM) data for all the peaks.
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1. 2024-10-19: add google drive link for 2.3 million cell meta data.
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2. 2024-09-25: add explanation in Discusssion for 4D and 4E dissections.
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@@ -32,7 +30,7 @@ There are some [[https://kzhang.org/SnapATAC2/changelog.html][break changes]] la
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- https://drive.google.com/drive/folders/1mule-CkxN939mxhYAqpOIxjPpq0j8qVP?usp=sharing
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- All the cellmeta information:
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- Google drive link: https://drive.google.com/drive/folders/1UNeOar5UuBNrIjB_z53s25nrm81arXPW?usp=share_link
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- - Sublcass-level DA (differential accessibiility) results, peudobulk-level count and CPM for all the peaks.
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+ - Sublcass-level DA (differential accessibiility) results:
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Zenodo link: https://zenodo.org/records/15069866
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** Pipeline
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