'make all' warning & 'make test' error: invalid syntax #45
Description
Hi all,
I'm having an issue with 'make all' and make test. I'm using a lua system to load modules.
Commands:
git clone https://github.com/benedictpaten/sonLib.git
cd sonLib
module use -a /projects/academic/vaalbert/modulefiles/Allluas
module load anaconda3
module load sonLib
make all
make test
Selected output from 'make all':
gcc -std=c99 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I inc -I ../lib/ -c impl/.c
impl/sonLibList.c: In function ‘st_list_sortP’:
impl/sonLibList.c:258:13: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
return ((int ()(const void *, const void ))fn)(((char **)a), *((char **)b));
^
impl/sonLibList.c: In function ‘stList_sort’:
impl/sonLibList.c:262:76: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
sort_r(list->list, stList_length(list), sizeof(void *), st_list_sortP, (void *)cmpFn);
^
impl/sonLibList.c: In function ‘st_list_sort2P’:
impl/sonLibList.c:267:56: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
int (*cmpFn)(const void *, const void *, void ) = (int ()(const void *, const void *, void *))(((void **)extra)[0]);
^
impl/sonLibList.c: In function ‘stList_sort2’:
impl/sonLibList.c:273:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
void *extra[2] = { (void *)cmpFn, (void *)extraArg };
Selected output from 'make test':
PYTHONPATH=.. PATH=../../bin:$PATH python allTests.py --testLength=SHORT --logLevel=CRITICAL
Traceback (most recent call last):
File "allTests.py", line 8, in
import bioioTest
File "/projects/academic/vaalbert/modulefiles/sonLib/bioioTest.py", line 69
print "Got %s levels, %s fileNo and %s maxTempFiles" % (levels, fileNo, maxTempFiles)
^
SyntaxError: invalid syntax
make: *** [test] Error 1
Any help with this issue would be greatly appreciated. Thank you!
-Steve