Releases: bcgsc/pori_ipr_client
v6.21.0
IPR Client v6.21.0 Release Notes
Bugfixes
[DEVSU-1967] - permissions bug where 'clinician' prevents access to data allowed by another role
[DEVSU-2015] - timeout on entering text in IPR causes changes not to be saved
[DEVSU-2019] - "Filter table text" in rapid report not working
Tasks
[DEVSU-1830] - add column in germline IPR report to flag variants reported in PCP-TGR
[DEVSU-1900] - update ipr client to display project descriptions
[DEVSU-2025] - Only display M1M2 on rapid report summary page if it has data
Improvements
[DEVSU-2028] - use displayName for rapid report summary variants where possible
v6.20.0
IPR Client v6.20.0 Release Notes
Bugfixes
[DEVSU-1949] - PMID column shows non-PMID things as broken links
New Features
[DEVSU-1984] - add captiv8 info to rapid report summary display
Tasks
[DEVSU-1961] - Move TO table earlier in the genomic report PDF
[DEVSU-1965] - Move comment column in rapid report table 1
[DEVSU-1982] - Remove 'IPR evidence level' column from Potential Therapeutic Targets table
[DEVSU-1992] - clearly label rna rows in rapid report tables 1 and 2
v6.19.2
IPR Client v6.19.2 Hotfix
New Features
[DEVSU-1962] - IPR - add rnaAltCount and rnaDepth as structuralVariant properties
v6.19.1
IPR Client v6.19.1 Release Notes
Bugfixes
[DEVSU-1959] - Unexpected aggregation in genomic report KB matches tables
[DEVSU-1987] - frontend bug with tmb kbvariant display
[DEVSU-1971] - visually split up kbmatches in rapid report 'Detailed View'
v6.19.0
IPR Client v6.19.0 Release Notes
Bug
[DEVSU-1951] - Should Graceful fail for unexpected format of string data
[DEVSU-1970] - PCP-TGR (pharmacogenomic) is not displaying normal alt/total counts when normal alt = 0
Task
[DEVSU-1973] - Remove 'analyst comments' and add 'knowledgebase matches' to the rapid report
Improvement
[DEVSU-1969] - use clearer error message for attempted access to 'forbidden' reports
[DEVSU-1975] - update alt/total and vaf % for rapid report
[DEVSU-1976] - Rename Rapid Report - Table 1
v6.18.2
v6.18.1
v6.18.0
IPR Client v6.18.0 Release Notes
Bugfixes
[DEVSU-1939] - primarySite kIQR in IPR small mutation section
Tasks
[DEVSU-1902] - create project summary view and allow non-admins to view it
[DEVSU-1926] - Comments field in rapid report
[DEVSU-1927] - Rapid report VAF field as percentage
[DEVSU-1945] - Fix MSI variants display on Rapid Report tables
Improvements
[DEVSU-1932] - add tumour_type to patient info displayed for the rapid report
v6.17.0
IPR Client v6.17.0 Release Notes
Bugfixes
[DEVSU-1913] - Template image upload for front-end are broken
Features
[DEVSU-1908] - Template update - Alt / Total counts replacing Ref / Alt columns
[DEVSU-1909] - Add fields to germline reports for CGL results
Tasks
[DEVSU-1903] - add support for previously_reported field in ipr_client
[DEVSU-1920] - add 'Variants of Unknown Significance' table to rapid report display
Improvements
[DEVSU-1925] - change table names in rapid report and display tumour type
v6.16.0
IPR Client v6.16.0 Release Notes
Bugfixes
[DEVSU-1893] - Print view css formatting now consistent with what is shown on webpage, fixing page cutoff differences for all summaries
[DEVSU-1912] - separate rapid api calls to accomodate for when tmbur data is not available
Features
[DEVSU-1871] - Add response when creating a user on IPR
Improvements
[DEVSU-1894] - Rapid report - changes requested Nov 15-22
- Sort and filter Potential Clinical Association by IPR evidence level first (if A exists ignore B)
- Mutation burden field name to be consistent with the genomic report, use Genome TMB (mut/mb): 2.00 for example.
- Rename Initial Tumour Content into Pathology Tumour Content and use 'pathology tumour content' value
- Additional VAF column (Rapid report only, not for the genomic or TGR). The formula is VAF = Alt read counts/Total read counts.