Merge pull request #627 from bcgsc/bugfix/DEVSU-2623-cancer-pred-fix

Bugfix/devsu 2623 cancer pred fix

Author: bnguyen-bcgsc

app/components/DataTable/components/ArrayCellRenderer/index.tsx

@@ -25,14 +25,14 @@ const RenderArrayCell = (fieldPath: string, isLink: boolean = false): (cellParam
       let link = firstVal;
       let validLink = false;
 
-      if (firstVal.match(/^\d+$/)) {
+      if (firstVal?.match(/^\d+$/)) {
         link = `https://ncbi.nlm.nih.gov/pubmed/${firstVal}`;
         validLink = true;
       } else if (urlRegex.test(firstVal)) {
         validLink = true;
       }
 
-      let linkComponent = firstVal;
+      let linkComponent = firstVal || '';
 
       if (validLink) {
         linkComponent = (

app/views/ReportView/components/CancerPredisposition/columnDefs.ts

@@ -56,54 +56,54 @@ const columnDefs: ColDef[] = [{
   colId: 'disease',
   field: 'disease',
   hide: false,
-  cellRendererFramework: ArrayCell('disease', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.disease', false),
 },
 {
   headerName: 'Association',
   colId: 'relevance',
   field: 'relevance',
-  cellRendererFramework: ArrayCell('relevance', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.relevance', false),
   hide: false,
 },
 {
   headerName: 'Context',
   colId: 'context',
   field: 'context',
-  cellRendererFramework: ArrayCell('context', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.context', false),
   hide: false,
 },
 {
   headerName: 'PMID',
   colId: 'reference',
   field: 'reference',
   hide: false,
-  cellRendererFramework: ArrayCell('reference', true),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.reference', true),
 },
 {
   headerName: 'Category',
   colId: 'category',
   field: 'category',
-  cellRendererFramework: ArrayCell('category', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.category', false),
   hide: true,
 },
 {
   headerName: 'Evidence Level',
   colId: 'evidenceLevel',
   field: 'evidenceLevel',
-  cellRendererFramework: ArrayCell('evidenceLevel', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.evidenceLevel', false),
   hide: false,
 },
 {
   headerName: 'IPR Evidence Level',
   colId: 'iprEvidenceLevel',
   field: 'iprEvidenceLevel',
-  cellRendererFramework: ArrayCell('iprEvidenceLevel', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.iprEvidenceLevel', false),
   hide: false,
 },
 {
   headerName: 'Matched Cancer',
   field: 'matchedCancer',
-  cellRendererFramework: ArrayCell('matchedCancer', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.matchedCancer', false),
   hide: true,
 },
 {
@@ -115,7 +115,7 @@ const columnDefs: ColDef[] = [{
 {
   headerName: 'Sample',
   field: 'sample',
-  cellRendererFramework: ArrayCell('sample', false),
+  cellRendererFramework: ArrayCell('kbMatchedStatements.sample', false),
   hide: false,
 },
 {