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#215: update 2020
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‎chunks/PDB_Database.txt‎

Lines changed: 19 additions & 1 deletion
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@@ -243,4 +243,22 @@ chunk.id cdr3.alpha v.alpha j.alpha cdr3.beta v.beta d.beta j.beta species mhc.a
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241 CAAVTGNTGKLIF TRAV4-4DV10*01 TRAJ37*01 CASSRGTIHSNTEVFF TRBV17*01 TRBJ1-1*01 MusMusculus H-2Db B2M MHCI ASNENMETM NP InfluenzaA PMID:34083463 7jwj
244244
242 CALSGFNNAGNMLTF TRAV16*01 TRAJ39*01 CASSLGGAGGADTQYF TRBV11-2*01 TRBJ2-3*01 HomoSapiens HLA-A*02:01:48 B2M MHCI RLQSLQTYV Spike SARS-CoV-2 https://github.com/antigenomics/vdjdb-db/issues/215 7n1e
245245
243 CAVNRDDKIIF TRAV12-2*01 TRAJ30*01 CASSPDIEQYF TRBV7-9*01 TRBJ2-7*01 HomoSapiens HLA-A*02:01:48 B2M MHCI YLQPRTFLL Spike SARS-CoV-2 https://github.com/antigenomics/vdjdb-db/issues/215 7n1f
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244 CVVNRNNDMRF TRAV12-1*01 TRAJ43*01 CAGQVTNTGELFF TRBV19*01 TRBJ2-2*01 HomoSapiens HLA-A*02:01:48 B2M MHCI YLQPRTFLL Spike SARS-CoV-2 https://github.com/antigenomics/vdjdb-db/issues/215 7n6e
246+
244 CVVNRNNDMRF TRAV12-1*01 TRAJ43*01 CAGQVTNTGELFF TRBV19*01 TRBJ2-2*01 HomoSapiens HLA-A*02:01:48 B2M MHCI YLQPRTFLL Spike SARS-CoV-2 https://github.com/antigenomics/vdjdb-db/issues/215 7n6e
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245 CAFFGQGAQKLVF TRAV38-1*01 TRAJ54*01 CASSLSASGGATDTQYF TRBV5-1*01 TRBJ2-3*01 HomoSapiens HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII GQVELGGGNAVEVCKGS Synthetic HomoSapiens PMID:34433824 6xc9
248+
246 CAVQAGGNNRLAF TRAV20*01 TRAJ7*01 CASSLERDGYTF TRBV5-1*01 TRBJ1-2*01 HomoSapiens HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII GQVELGGGNAVEVCK Synthetic HomoSapiens PMID:34433824 6xco
249+
247 CIVSHNAGNMLTF TRAV26-1*01 TRAJ39*01 CASSLERETQYF TRBV5-1*01 TRBJ2-5*01 HomoSapiens HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII GQVELGGGNAVEVCKGS Synthetic HomoSapiens PMID:34433824 6xcp
250+
248 CAVTNQAGTALIF TRAV21*01 TRAJ15*01 CASSYSIRGSRGEQFF TRBV6-5*01 TRBJ2-1*0 HomoSapiens HLA-E*01:03 B2M MHCI RLPAKAPLL ENR M.tuberculosis PMID:35108401 6zkw
251+
249 CAVTNQAGTALIF TRAV21*01 TRAJ15*01 CASSYSIRGSRGEQFF TRBV6-5*01 TRBJ2-1*01 HomoSapiens HLA-E*01:03 B2M MHCI RLPAKAPLLGCG ENR M.tuberculosis PMID:35108401 6zkx
252+
250 CAVTNQAGTALIF TRAV21*01 TRAJ15*01 CASSYSIRGSRGEQFF TRBV6-5*01 TRBJ2-1*01 HomoSapiens HLA-E*01:03 B2M MHCI RLPAKAPL ENR M.tuberculosis PMID:35108401 6zky
253+
251 CAVTNQAGTALIF TRAV21*01 TRAJ15*01 CASSYSIRGSRGEQFF TRBV6-5*01 TRBJ2-1*01 HomoSapiens HLA-E*01:03 B2M MHCI RLPAKAPL ENR M.tuberculosis PMID:35108401 6zkz
254+
252 CIVRGLNNAGNMLTF TRAV26-1*01 TRAJ39*01 CASSLGIDAIYF TRBV12-3*01 TRBJ1-3*01 HomoSapiens HLA-B*81:01 B2M MHCI TPQDLNTML Gag HIV1 https://github.com/antigenomics/vdjdb-db/issues/215 7dzm
255+
253 CIVRGLNNAGNMLTF TRAV26-1*01 TRAJ39*01 CASSLGIDAIYF TRBV12-3*01 TRBJ1-3*01 HomoSapiens HLA-B*42:01 B2M MHCI TPQDLNTML Gag HIV1 https://github.com/antigenomics/vdjdb-db/issues/215 7dzn
256+
254 CLVGSSFNQGGKLIF TRAV4*01 TRAJ23*01 CASSLGREYGYTF TRBV7-9*01 TRBJ1-2*01 HomoSapiens HLA-E*01:03 B2M MHCI RMYSPVSIL Gag HIV1 PMID:35108401 7ndq
257+
255 CLVGSSFNQGGKLIF TRAV4*01 TRAJ23*01 CASSLGREYGYTF TRBV7-9*01 TRBJ1-2*01 HomoSapiens HLA-E*01:03 B2M MHCI RMYSPVSI Gag HIV1 PMID:35108401 7ndu
258+
256 CALDIYPHDMRF TRAV6*01 TRAJ43*01 CASSLDPGDTGELFF TRBV11-2*01 TRBJ2-2*01 HomoSapiens HLA-A*02 B2M MHCI HMTEVVRHC TP53 Homo sapiens PMID:35124005 7rm4
259+
257 CAVNRDDKIIF TRAV12-2*01 TRAJ30*01 CASSPDIEQYF TRBV7-9*01 TRBJ2-7*01 HomoSapiens HLA-A*02:01 B2M MHCI YLQPRTFLL Spike SARS-CoV-2 PMID:34685626 7rtr
260+
258 CAGNTGTASKLTF TRAV12-2*01 TRAJ44*01 CASSGLAGGPVSGANVLTF TRBV9*01 TRBJ2-6*01 HomoSapiens HLA-A*03:01 B2M MHCI ALHGGWTTK PIK3CA Homo sapiens https://github.com/antigenomics/vdjdb-db/issues/215 7l1d
261+
259 CALSGGTSYGKLTF TRAV9-2*01 TRAJ52*01 CASSQGQDTEAFF TRBV7-3*01 TRBJ1-1*01 HomoSapiens HLA-DQA1*05 HLA-DQB1*02 MHCII QPFPQPEQPFP DQ2-GLIA-OMEGA1 Homo sapiens https://github.com/antigenomics/vdjdb-db/issues/215 7sg0
262+
260 CLVGGLARDMRF TRAV4*01 TRAJ43*01 CSVALGSDTGELFF TRBV29-1*01 TRBJ2-2*01 HomoSapiens HLA-DQA1*05 HLA-DQB1*02 MHCII LQPFPQPELPYGSGGS DQ2-GLIA-OMEGA1 Homo sapiens https://github.com/antigenomics/vdjdb-db/issues/215 7sg1
263+
261 CLVGGLARDMRF TRAV4*01 TRAJ43*01 CSVALGSDTGELFF TRBV29-1*01 TRBJ2-2*01 HomoSapiens HLA-DQA1*05 HLA-DQB1*02 MHCII LQPFPQPELPYGSGGS DQ2-GLIA-OMEGA1 Homo sapiens https://github.com/antigenomics/vdjdb-db/issues/215 7sg2
264+
262 CLVGGAYTGGFKTIF TRAV4*01 TRAJ9*01 CASSLVAETYEQYF TRBV11-2*01 TRBJ2-7*01 HomoSapiens HLA-A*03:01 B2M MHCI ALHGGWTTK PIK3CA HomoSapiens https://github.com/antigenomics/vdjdb-db/issues/215 7rrg

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