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fix lacking gene names filtering
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py_src/DefaultDBGenerator.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -116,7 +116,7 @@ def generate_default_db(master_table: pd.DataFrame) -> pd.DataFrame:
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complex_id = 0
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for chain in ["alpha", "beta"]:
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if clone[f"cdr3.{chain}"]:
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if clone[f"cdr3.{chain}"] and clone[f"v.{chain}"] and clone[f"j.{chain}"]:
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clone_compact = {
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"complex.id": complex_id,
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"gene": "TRA" if chain == "alpha" else "TRB",

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