Add ability to auto-generate images from report and presentation

Author: rzitomer

Snakefile

@@ -5,7 +5,7 @@ rule run_analysis:
         results_path = directory("results/")
     params:
         python_hash_seed = 0,
-        n_workers = 8,
+        n_workers = 1,
         n_projects = 1000,
         min_commits = None,
         min_count = 5,
@@ -16,6 +16,14 @@ rule run_analysis:
     shell:
         "PYTHONHASHSEED={params.python_hash_seed} python src/github_analysis/main.py -dp {input.data_path} -rp {output.results_path} -nw {params.n_workers} -np {params.n_projects} -mc {params.min_commits} -mcount {params.min_count} -nps {params.n_personas} -nn {params.n_neurons} -ni {params.n_iter} -rs {params.random_state}"
 
+rule generate_images:
+    input:
+        data_path="/Users/richiezitomer/Documents/RStudio-Data-Repository/clean_data/commits_by_org.feather",
+        embedding_path="results/embeddings.csv"
+    shell:
+        "python src/github_analysis/make_report.py -dp {input.data_path} -ep {input.embedding_path}"
+
+
 # Commented out because repo is currently over bandwidth: https://help.github.com/en/articles/about-storage-and-bandwidth-usage
 #rule clone_data_repo:
 #    shell: "git clone https://github.com/UBC-MDS/RStudio-Data-Repository.git"