Search results

Applying Celltypist to sparse Visium HD: unexpected predictions and advice?

Status: Open.

#163 In Teichlab/celltypist;

· oghzzang opened on Oct 29, 2025

Programmatic Access to Cell Ontology Mappings for All CellTypist Model Cell Types

Status: Open.

#162 In Teichlab/celltypist;

· nick-youngblut opened on Oct 28, 2025

celltypist for Spatial transcriptmoic data (visium HD) annotation?

Status: Open.

#160 In Teichlab/celltypist;

· KunHHE opened on Sep 28, 2025

Annotation fails on sparse h5ad file if model trained with <code>with_mean = False</code>

Status: Open.

#159 In Teichlab/celltypist;

· danielsf opened on Aug 28, 2025

How are the built - in models trained?

Status: Open.

#158 In Teichlab/celltypist;

· Lucyyang1991 opened on Aug 11, 2025

Thoughts on adding SVM as a classifier?

Status: Open.

#157 In Teichlab/celltypist;

· derrik-gratz opened on Aug 1, 2025

TypeError: main() got an unexpected keyword argument 'use_gpu'

Status: Open.

#154 In Teichlab/celltypist;

· bbimber opened on Jun 23, 2025

models download when we want to use inhouse model

Status: Open.

#151 In Teichlab/celltypist;

· Hphilippon opened on May 5, 2025

How to train a celltypist model if the scRNA dataset is very large and unbanlanced?

Status: Open.

#150 In Teichlab/celltypist;

· Mark-wt opened on Apr 27, 2025

converting mouse symbols to IDs file similar to GENCODEv44_Gene_id2name.csv

Status: Open.

#149 In Teichlab/celltypist;

· alyamahmoud opened on Apr 14, 2025

Why are features in my custom CellTypist model converted to numbers (Entrez IDs)?

Status: Open.

#148 In Teichlab/celltypist;

· SSSJe opened on Apr 14, 2025

predictions after scvi integration

Status: Open.

#145 In Teichlab/celltypist;

· pirlowang opened on Feb 4, 2025