Feature Overview

[Kohze]

SpatialMaps Feature List:

pRolocdata:

• Registration
• Login
• Password Reset
• Object Upload
• Object Download
• Database Backup (with DB secret)

Enhancements:

• Upload private dataset
• Toggle private to public dataset

SpatialMaps:
Front Page:

• Introduction
• Idea & Foundation
• Technology

About Page:

• Video Animation
• Environment
• R & SpatialMaps
• Collaboration and Open Data

Login Page:

• Login
• Register
• Password Reset
• Change password

Profile Page:

• Upload file / dataset
• show uploaded datasets (with public/private toggle)
• private link share functionality

Datasets Page:

• Search Bar & Filters
• Datasets: Metadata
• Datasets: SpatialDistribution Image
• Datasets: Name
• Datasets: Species Image

Enhancements:

• Show accessible private dataset (own data sets and shared ones)

DataView Page:
Top-left:

• Comments
• Download
• MetaData
• Scatter point size
• Hide/Color Unknown

Top-right:

• PCA toggle
• T-SNE toggle
• Profile toggle
• UniProt toggle

Main Plot:
PCA / T-SNE plot:

• clickable points
• dynamic zooming
• coordinate axes
• dynamic point size
• dynamic color (based on column)

Profile plot:

• brush select lines to filter
• dynamic coloring
• axis-inversion and movement

UniProt / API Module:

• Load additional data via Iframe

Sub-Plot Area:

• Filter Search
• Legend Buttons (with colored border, clickable to toggle points)
• Plot Reset Button
• Plot Enlarge/Minify Button
• Additional Tools (zoom tool, drag tool)

Table:
Clickable table headers

• Color by column
• Radius by column
• Transparency by column
• Sort by column
• Dynamic table columns (drag to enlarge)

Documentation Overview Page:

• SpatialMaps
• pRoloc
• MSnbase
• API (could be replaced by something more meaningful)
• Data Storage
• Accounts