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Step 3
Rudolf Bumm edited this page Dec 22, 2020
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Step 3: Run Lung CT Analyzer
- Select the 'Lung CT Analyzer' extension. It can be found in 3D Slicer under the 'Chest Imaging Platform' category
- Pick the input volume (required): Select a high resolution lung images series of the presently loaded DICOM CT data set
- Pick the 'Right lung mask' segmentation (required)
- Pick the 'Left lung mask' segmentation (required)
- Adjust the thresholds for areas of interest.
- Check 'Include COVID-19 evaluation' if you want to do produce an affected / funtional volume (CovidQ) evaluation. Evaluation phase. Not for clinical decision making.
- Press 'Compute results'
Lung CT Analyzer
- Step 1: Start 3D Slicer
- Step 2: Run Lung CT Segmenter
- Step 2: Option: Run Lung CT Segmenter with AI tools
- Step 2: Option: add airway segmentation
- Step 3: Run Lung CT Analyzer
Use cases