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Myelin derivatives #2

@tsalo

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@tsalo

See https://www.notion.so/NiBS-myelin-mapping-1c42e9b4cd198095a5bef141c2617755 as well.

  1. T1w and T2w
    • SPACE T1w / SPACE T2w
    • MPRAGE T1w / SPACE T2w
  2. DWI
    • Fractional anisotropy (FA)
    • Axial diffusivity (AD)
    • Axonal water fraction (AWF)
    • Mean diffusivity (MD)
    • Mean kurtosis (MK)
    • Radial diffusivity (RD)
    • Extra-cellular compartment radial diffusivity (RDe)
    • Radial kurtosis (RK)
    • g-ratio?
  3. Quantitative susceptibility mapping (QSM) and ME-SE
    • Χ-separation-based myelin map, using just QSM map
    • Χ-separation-based myelin map, using QSM and R2’ maps
    • SEPIA-based Chimap
  4. Inhomogeneous magnetization transfer with rapid gradient-echo (ihMTRAGE)
    • Inhomogeneous magnetization transfer ratio (ihMTR)
    • Magnetization transfer ratio (MTR)
    • ihMTsat
    • ihMTsat from dual-offset images (MTdsat)?
    • ihMTsat from single-offset images (MTssat)?
    • ihMTsat image normalized by squared B1 (ihMTsatB1sq)?
    • ihMTsat from single-offset images normalized by squared B1 (MTdsatB1sq)?
    • ihMTsat from dual-offset images normalized by squared B1 (MTssatB1sq)?
  5. MP2RAGE
    • Quantitative T1 map (T1)
    • Bias-corrected quantitative T1 map

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