ModelFrame field df #7
Description
I attempted to try running the sample data using the first control file, and found an error message reporting a missing field df in the ModelFrame type. I am running Julia 1.0.4. My console looks like this:
julia> using MendelGWAS
[ Info: Precompiling MendelGWAS [c1bad3ca-268b-5bf6-b82e-de8a361f94db]
[ Info: Loading DataFrames support into Gadfly.jl
julia> cd("/home/gchen/Code/julia/MendelGWAS.jl/data")
julia> GWAS("gwas 1 Control.txt")
Welcome to OpenMendel's
GWAS analysis option
Reading the data.
The current working directory is "/home/gchen/Code/julia/MendelGWAS.jl/data".
Keywords modified by the user:
affected_designator = 2
control_file = gwas 1 Control.txt
manhattan_plot_file = gwas 1 Output Manhattan Plot.png
output_file = gwas 1 Output Summary.txt
output_table = gwas 1 Output Table.txt
pedigree_file = gwas 1 data.fam
plink_input_basename = gwas 1 data
qq_plot_file = gwas 1 Output QQ Plot.png
regression = linear
regression_formula = Trait ~ Sex
snpdata_file = gwas 1 data.bed
snpdefinition_file = gwas 1 data.bim
Analyzing the data.
ERROR: type ModelFrame has no field df
Stacktrace:
[1] getproperty(::Any, ::Symbol) at ./sysimg.jl:18
[2] gwas_option(::MendelBase.Person, ::MendelBase.SnpDataStruct, ::DataFrames.DataFrame, ::Dict{AbstractString,Any}) at /home/gchen/.julia/packages/MendelGWAS/8an7U/src/MendelGWAS.jl:300
[3] #GWAS#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{,Tuple{}}}, ::Function, ::String) at /home/gchen/.julia/packages/MendelGWAS/8an7U/src/MendelGWAS.jl:103
[4] GWAS(::String) at /home/gchen/.julia/packages/MendelGWAS/8an7U/src/MendelGWAS.jl:34
[5] top-level scope at none:0
julia>