Merge pull request #14 from OSIPI/main

Merge main into branch

Author: oliverchampion

.gitignore

@@ -1,6 +1,5 @@
 .idea*
 .github*
-*.nii.gz
 __pycache__/
 
 

src/original/IAR_LundUniversity/ivim_fit_method_modified_topopro.py

@@ -8,7 +8,7 @@
 
 class IvimModelTopoPro(ReconstModel):
 
-    def __init__(self, gtab, bounds=[[0,1], [0.005, 0.1], [1e-5, 0.004]], \
+    def __init__(self, gtab, bounds=[[0, 0.005, 1e-5], [1, 0.1, 0.004]], \
         rescale_units=False, shgo_iters=5, rescale_results_to_mm2_s=False):
         r""" Initialize an IvimModelTP class.
         This particular script was modified as the DIPY version has stringent