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Update getTestData.m to retrieve and use OSIPI Zenodo data
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  • src/original/ASD_MemorialSloanKettering/MRI-QAMPER_IVIM

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+13
-5
lines changed
Lines changed: 13 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -1,8 +1,16 @@
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function [img_nii,bval_file,roi_nii,save_folder] = getTestData
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function [img_nii,bval_file,roi_nii] = getTestData
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[d,~,~] = fileparts(which('getTestData'));
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test_data_folder = fullfile(d,'test_data');
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if ~exist(test_data_folder,'dir')
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mkdir(test_data_folder);
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end
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img_nii = fullfile(d,'test_data','702-HN401D-D2019_10_08.nii.gz');
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bval_file = fullfile(d,'test_data','702-HN401D-D2019_10_08.bval');
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roi_nii = fullfile(d,'test_data','702-HN401D-D2019_10_08_BD_REDO_SV.nii.gz');
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save_folder = fullfile(d,'test_data');
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zenodo_url = 'https://zenodo.org/records/14605039/files/OSIPI_TF24_data_phantoms.zip';
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save_zip = fullfile(test_data_folder,'OSIPI_TF24_data_phantoms.zip');
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websave(save_zip,zenodo_url);
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unzip(save_zip, test_data_folder);
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img_nii = fulllfile(test_data_folder,'Data','brain.nii.gz');
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bval_file = fulllfile(test_data_folder,'Data','brain.bval');
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roi_nii = fulllfile(test_data_folder,'Data','brain_mask_gray_matter.nii.gz');

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