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report on repo
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‎.gitignore

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nosetests.xml
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coverage.xml
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*.pyc
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local.env

‎combined_report.html

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<table border="1" class="dataframe">
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<thead>
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<tr style="text-align: right;">
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<th>Technique</th>
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<th>Subfolder</th>
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<th>Contributors</th>
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<th>Tested</th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td>IVIM</td>
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<td>OGC_AmsterdamUMC</td>
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<td>Oliver Gurney-Champion</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>OGC_AmsterdamUMC</td>
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<td>Oliver Gurney-Champion</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>Tri-exponential</td>
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<td>OGC_AmsterdamUMC</td>
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<td>Oliver Gurney-Champion</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>Tri-exponential</td>
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<td>OGC_AmsterdamUMC</td>
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<td>Oliver Gurney-Champion</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>OGC_AmsterdamUMC</td>
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<td>Oliver Gurney-Champion/Sebastiano Barbieri</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>PvH_KB_NKI</td>
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<td>Petra van Houdt/Stefan Zijlema/Koen Baas</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>PV_MUMC</td>
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<td>Paulien Voorter</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Farooq et al. Modified by Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Fadnavis et al. Modified by Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Modified by Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>IAR_LundUniversity</td>
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<td>Modified by Ivan A. Rashid</td>
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<td>Yes</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>OJ_GU</td>
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<td>Oscar Jalnefjord</td>
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<td>No</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>OJ_GU</td>
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<td>Oscar Jalnefjord</td>
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<td>No</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>OJ_GU</td>
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<td>Oscar Jalnefjord</td>
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<td>No</td>
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</tr>
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<tr>
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<td>IVIM</td>
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<td>ETP_SRI</td>
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<td>Eric Peterson</td>
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<td>Yes</td>
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</tr>
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</tbody>
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</table>

‎local.env.example

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REPO_DIR=/path/to/your/repo
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CODE_CONTRIBUTIONS_FILE=/path/to/your/code_contributions_record.csv
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ALGORITHMS_FILE=/path/to/your/algorithms.json

‎repostatus.py

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import os
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import pandas as pd
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from dotenv import load_dotenv
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import json
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# Load environment variables
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load_dotenv(r'C:\Users\home\tf2.4\TF2.4_IVIM-MRI_CodeCollection\local.env')
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# Read the CSV file
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csv_file_path = os.getenv('CODE_CONTRIBUTIONS_FILE')
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df = pd.read_csv(csv_file_path)
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unique_subfolders = df['subfolder'].unique().tolist()
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# Read the JSON file
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algorithms_file_path = os.getenv('ALGORITHMS_FILE')
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with open(algorithms_file_path, 'r') as f:
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algorithms_data = json.load(f)
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# Get a list of all algorithms from the JSON file
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all_algorithms = algorithms_data['algorithms']
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# Add a new column 'Tested' to the DataFrame if it starts with that of subfolder
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df['Tested'] = df.apply(lambda row: 'Yes' if any(algorithm.startswith(row['subfolder'].split('_')[0]) for algorithm in all_algorithms) else 'No', axis=1)
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# Select the desired columns
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df_selected = df[['Technique', 'subfolder', 'Authors', 'Tested']]
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df_selected.columns = ['Technique', 'Subfolder', 'Contributors', 'Tested']
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# Convert the DataFrame to HTML
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html_string = df_selected.to_html(index=False)
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# Save the HTML to a file
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with open('combined_report.html', 'w') as f:
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f.write(html_string)
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# printing message that report have been succesfully generated
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print("Combined HTML report generated successfully.")

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