Merge pull request #700 from MiraGeoscience/hotfix/0.10.1

Hotfix 0.10.1

Author: sebhmg

docs/conf.py

@@ -18,6 +18,7 @@
 from datetime import datetime
 from pathlib import Path
 from importlib.metadata import version
+from packaging.version import Version
 
 sys.path.append(str(Path("_ext").resolve()))
 sys.path.append(str(Path().parent.resolve()))
@@ -44,8 +45,8 @@
 
 # The full version, including alpha/beta/rc tags.
 release = version("geoh5py")
-# The short X.Y.Z version.
-version = ".".join(release.split(".")[:3])
+# The shorter X.Y.Z version.
+version = Version(release).base_version
 
 # If your documentation needs a minimal Sphinx version, state it here.
 needs_sphinx = "2.2.1"

geoh5py/__init__.py

@@ -20,7 +20,7 @@
 
 # flake8: noqa
 
-__version__ = "0.10.0"
+__version__ = "0.10.1"
 
 import inspect
 

geoh5py/objects/drillhole.py

@@ -811,12 +811,10 @@ def compute_intervals(survey: np.ndarray, collar, end_of_hole) -> dict:
         norm[norm == 0.0] = INFINITE_RADIUS
         tangential /= norm[:, None]
         alpha = np.abs(0.5 * np.pi - np.arctan2(dot, vr))
+        alpha[alpha == 0.0] = INFINITE_RADIUS**-1.0
         delta_depth = np.diff(full_survey[:, 0])
         radius = delta_depth / alpha
 
-        radius[alpha == 0.0] = delta_depth[alpha == 0.0] * INFINITE_RADIUS
-        alpha[alpha == 0.0] = delta_depth[alpha == 0.0] / radius[alpha == 0.0]
-
         intervals = {
             "depths": np.r_[full_survey[:, 0]],
             "rad": np.r_[radius, INFINITE_RADIUS],

geoh5py/objects/grid_object.py

@@ -120,12 +120,11 @@ def origin(self, values: np.ndarray | list | tuple):
             raise ValueError(f"Array of 'origin' must be of dtype = {ORIGIN_TYPE}")
 
         self._centroids = None
+        self._origin = values
 
-        if getattr(self, "_origin", None) is not None and self.on_file:
+        if self.on_file:
             self.workspace.update_attribute(self, "attributes")
 
-        self._origin = values
-
     @property
     @abstractmethod
     def shape(self) -> np.ndarray:

geoh5py/objects/octree.py

@@ -223,6 +223,9 @@ def u_cell_size(self, value: Real):
             raise TypeError("Attribute 'u_cell_size' must be type(float).")
 
         self._u_cell_size = float(value)
+        self._centroids = None
+        if self.on_file:
+            self.workspace.update_attribute(self, "attributes")
 
     @property
     def u_count(self) -> int:
@@ -244,6 +247,9 @@ def v_cell_size(self, value: Real):
             raise TypeError("Attribute 'v_cell_size' must be type(float).")
 
         self._v_cell_size = float(value)
+        self._centroids = None
+        if self.on_file:
+            self.workspace.update_attribute(self, "attributes")
 
     @property
     def v_count(self) -> int:
@@ -323,6 +329,9 @@ def w_cell_size(self, value: Real):
             raise TypeError("Attribute 'w_cell_size' must be type(float).")
 
         self._w_cell_size = float(value)
+        self._centroids = None
+        if self.on_file:
+            self.workspace.update_attribute(self, "attributes")
 
     @property
     def w_count(self) -> int:

meta.yaml

@@ -1,5 +1,5 @@
 {% set name = "geoh5py" %}
-{% set version = "0.10.0" %}
+{% set version = "0.10.1" %}
 
 package:
   name: {{ name|lower }}

pyproject.toml

@@ -1,7 +1,7 @@
 [tool.poetry]
 name = "geoh5py"
 
-version = "0.10.0"
+version = "0.10.1"
 
 license = "LGPL-3.0-or-later"
 description = "Python API for geoh5, an open file format for geoscientific data"