Merge pull request #3898 from LinuxForHealth/lee-main

Miscelanous build, install, and actions workflow edits

Author: lmsurpre

.github/workflows/build.yml

@@ -143,7 +143,6 @@ jobs:
         JAVADOC_GOAL=""
         if [ "${{ matrix.java }}" = "11" ]
         then
-          export OLD_JAVA_HOME=/opt/hostedtoolcache/AdoptOpenJDK/1.0.0-ga-11-jdk-hotspot-linux-x64-normal-latest/x64/
           JAVADOC_GOAL=" -Pvalidate-javadoc javadoc:javadoc "
         fi
         mvn -B org.apache.maven.plugins:maven-dependency-plugin:3.1.2:go-offline -f fhir-parent --no-transfer-progress -DexcludeReactor=true -Dmaven.wagon.http.retryHandler.count=3

.github/workflows/javadocs.yml

@@ -53,7 +53,6 @@ jobs:
     - name: Build fhir-parent without tests
       run: |
             cd fhir
-            export OLD_JAVA_HOME=/opt/hostedtoolcache/AdoptOpenJDK/1.0.0-ga-11-jdk-hotspot-linux-x64-normal-latest/x64/
             mvn -ntp -B -N -Pset-version-release clean -f fhir-parent -Ddeploy.version=${TAG_VERSION} -Dfhir-tools.version=${TAG_VERSION} -Dmaven.wagon.http.retryHandler.count=3
             mvn -ntp -DskipTests -B clean install org.apache.maven.plugins:maven-javadoc-plugin:3.0.1:javadoc-no-fork org.apache.maven.plugins:maven-javadoc-plugin:3.0.1:test-javadoc-no-fork org.apache.maven.plugins:maven-javadoc-plugin:3.0.1:aggregate -f fhir-parent  -Ddeploy.version=${TAG_VERSION} -Dfhir-tools.version=${TAG_VERSION}  -Dmaven.wagon.http.retryHandler.count=3
             cp -R fhir-parent/target/site/apidocs ../apidocs/

.github/workflows/javadocs_force_build.txt

@@ -12,7 +12,48 @@ permissions:
   packages: write
 
 jobs:
-  image-refresh:
+  ghcr:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        java: [ '11' ]
+        tag: [ '5.0.0-RC1' ]
+      fail-fast: false
+    steps:
+    - uses: actions/checkout@v2
+      with:
+        ref: refs/tags/${{ matrix.tag }}
+    - name: Setup java
+      uses: actions/setup-java@v3
+      with:
+        distribution: 'temurin'
+        java-version: ${{ matrix.java }}
+        cache: 'maven'
+    - name: Log in to GitHub Container Registry
+      uses: docker/login-action@v2
+      with:
+        registry: ghcr.io
+        username: ${{ github.actor }}
+        password: ${{ secrets.GITHUB_TOKEN }}
+    - name: Build and Release
+      env:
+        BASE: origin/${{ github['base_ref'] }}
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        GPG_PASSPHRASE: ${{ secrets.GPG_PASSPHRASE }}
+        GPG_KEYNAME: ${{ secrets.GPG_KEYNAME }}
+        GPG_KEY_FILE: ${{ secrets.GPG_KEY_FILE }}
+      run: |
+        # set GITHUB_REF so we can use the same logic we use for our tag-push release
+        export GITHUB_REF=refs/tags/${{ matrix.tag }}
+        . build/release/global.sh
+        bash build/release/00_prep.sh
+        bash build/release/10_build.sh
+        bash build/release/20_test.sh
+        # go straight to the docker release instead of calling 30_release.sh
+        # which uploads the build artifacts to Sonatype OSSRH in the tag release workflow
+        bash build/release/bin/30_release/1_docker.sh
+        bash build/release/40_drop.sh
+  dockerhub:
     runs-on: ubuntu-latest
     strategy:
       matrix:
@@ -29,18 +70,18 @@ jobs:
         distribution: 'temurin'
         java-version: ${{ matrix.java }}
         cache: 'maven'
+    - name: Log in to Docker Hub
+      uses: docker/login-action@v2
+      with:
+        username: ${{ secrets.DOCKERHUB_USERNAME }}
+        password: ${{ secrets.DOCKERHUB_TOKEN }}
     - name: Build and Release
       env:
         BASE: origin/${{ github['base_ref'] }}
         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-        DOCKERHUB_USERNAME: ${{ secrets.DOCKERHUB_USERNAME }}
-        DOCKERHUB_TOKEN: ${{ secrets.DOCKERHUB_TOKEN }}
         GPG_PASSPHRASE: ${{ secrets.GPG_PASSPHRASE }}
         GPG_KEYNAME: ${{ secrets.GPG_KEYNAME }}
         GPG_KEY_FILE: ${{ secrets.GPG_KEY_FILE }}
-        OSSRH_USERNAME: ${{ secrets.OSSRH_USERNAME }}
-        OSSRH_PASSWORD: ${{ secrets.OSSRH_PASSWORD }}
-        OLD_JAVA_HOME: /opt/hostedtoolcache/AdoptOpenJDK/1.0.0-ga-11-jdk-hotspot-linux-x64-normal-latest/x64/
       run: |
         # set GITHUB_REF so we can use the same logic we use for our tag-push release
         export GITHUB_REF=refs/tags/${{ matrix.tag }}

.github/workflows/rebuild.yml

@@ -36,7 +36,7 @@ jobs:
       uses: docker/login-action@v2
       with:
         registry: ghcr.io
-        username: ${{ github.repository_owner }}
+        username: ${{ github.actor }}
         password: ${{ secrets.GITHUB_TOKEN }}
     - name: Build and Release
       env:
@@ -47,7 +47,6 @@ jobs:
         GPG_KEY_FILE: ${{ secrets.GPG_KEY_FILE }}
         OSSRH_USERNAME: ${{ secrets.OSSRH_USERNAME }}
         OSSRH_PASSWORD: ${{ secrets.OSSRH_PASSWORD }}
-        OLD_JAVA_HOME: /opt/hostedtoolcache/AdoptOpenJDK/1.0.0-ga-11-jdk-hotspot-linux-x64-normal-latest/x64/
       run: |
         . build/release/global.sh
         bash build/release/00_prep.sh

.github/workflows/release.yml

@@ -36,8 +36,9 @@ fi
 # we hit 'gpg: signing failed: Cannot allocate memory' when running -T2C
 export BUILD_PROFILES=" $(jq -r '.build[] | select(.type == "fhir-parent").profiles | map(.) | join(",")' build/release/config/release.json)"
 export BUILD_PROFILES="${BUILD_PROFILES},deploy-to-sonatype"
-mvn package war:war source:jar source:test-jar javadoc:jar gpg:sign deploy \
+mvn package source:jar source:test-jar javadoc:jar gpg:sign deploy \
     -DadditionalJOption=-Xdoclint:none \
+    -DretryFailedDeploymentCount=3
     -f fhir-parent -P "${BUILD_PROFILES}" -DskipTests
 
 # EOF

build/release/bin/30_release/0_sonatype.sh

@@ -29,9 +29,6 @@
             "type": "jvm"
         }
     ],
-    "java": {
-        "OLD_JAVA_HOME": "/opt/hostedtoolcache/AdoptOpenJDK/1.0.0-ga-11-jdk-hotspot-linux-x64-normal-latest/x64"
-    },
     "build": [
         {
             "type": "fhir-tools",

build/release/config/release.json

@@ -13,7 +13,7 @@ Executing $0 to deploy the fhir-server web application...
 
 # Determine the location of this script.
 # basedir=`dirname "$0"`
-cd $(dirname $0); basedir="$(pwd)/"
+cd $(dirname $0); basedir="$(pwd)"
 
 # Default liberty install location
 UNZIP_LOC=`unset CDPATH; cd "$basedir/.." && pwd`