-
Notifications
You must be signed in to change notification settings - Fork 23
Open
Description
[Mon Oct 7 13:51:39 2019] Start reading bam file.
[Mon Oct 7 13:51:58 2019] Finish sorting Chimeric bam reads.
[Mon Oct 7 13:52:00 2019] Finish removing PCR duplicates.
[Mon Oct 7 13:52:01 2019] Building nodes. |bamdiscordant|=502321
[Mon Oct 7 14:17:55 2019] Building nodes, finish seeding.
squid: src/SegmentGraph.cpp:664: void SegmentGraph_t::BuildNode_STAR(const std::vector&, SBamrecord_t&, std::string): Assertion `(vNodes[i].Chr!=vNodes[i+1].Chr) || (vNodes[i].Chr==vNodes[i+1].Chr && vNodes[i].Position+vNodes[i].Length<=vNodes[i+1].Position)' failed.
Aborted (core dumped)
Metadata
Metadata
Assignees
Labels
No labels