Merge branch 'main' into fix-6220-use-fast-path-when-grouping-unique-monotonic-variable

Author: dcherian

.pre-commit-config.yaml

@@ -16,13 +16,13 @@ repos:
         files: ^xarray/
   - repo: https://github.com/charliermarsh/ruff-pre-commit
     # Ruff version.
-    rev: 'v0.0.237'
+    rev: 'v0.0.248'
     hooks:
       - id: ruff
         args: ["--fix"]
   # https://github.com/python/black#version-control-integration
   - repo: https://github.com/psf/black
-    rev: 22.12.0
+    rev: 23.1.0
     hooks:
       - id: black
       - id: black-jupyter
@@ -31,10 +31,10 @@ repos:
     hooks:
       - id: blackdoc
         exclude: "generate_aggregations.py"
-        additional_dependencies: ["black==22.12.0"]
+        additional_dependencies: ["black==23.1.0"]
       - id: blackdoc-autoupdate-black
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v0.991
+    rev: v1.0.1
     hooks:
       - id: mypy
         # Copied from setup.cfg

HOW_TO_RELEASE.md

@@ -59,7 +59,7 @@ upstream        https://github.com/pydata/xarray (push)
      .. _whats-new.YYYY.MM.X+1:
 
      vYYYY.MM.X+1 (unreleased)
-     ---------------------
+     -----------------------
 
      New Features
      ~~~~~~~~~~~~
@@ -94,8 +94,8 @@ upstream        https://github.com/pydata/xarray (push)
 
 13. Update the version available on pyodide:
     - Open the PyPI page for [Xarray downloads](https://pypi.org/project/xarray/#files)
-    - Clone the [pyodide repository](https://github.com/pyodide/pyodide).
-    - Edit `packages/xarray/meta.yaml` to update the
+    - Edit [`pyodide/packages/xarray/meta.yaml`](https://github.com/pyodide/pyodide/blob/main/packages/xarray/meta.yaml) to update the
+        - version number
         - link to the wheel (under "Built Distribution" on the PyPI page)
         - SHA256 hash (Click "Show Hashes" next to the link to the wheel)
     - Open a pull request to pyodide

doc/_static/dataset-diagram-logo.pdf

@@ -1,6 +1,12 @@
-\documentclass[class=minimal,border=0pt,convert={size=600,outext=.png}]{standalone}
+% For svg output:
+% 1. Use second \documentclass line.
+% 2. Install potrace : mamba install -c bioconda potrace
+% As of Feb 14, 2023: svg does not work. PDF does work
+% \documentclass[class=minimal,border=0pt,convert={size=600,outext=.png}]{standalone}
+\documentclass[class=minimal,border=0pt,convert={size=600,outext=.svg}]{standalone}
 % \documentclass[class=minimal,border=0pt]{standalone}
 \usepackage[scaled]{helvet}
+\usepackage[T1]{fontenc}
 \renewcommand*\familydefault{\sfdefault}
 
 % ===========================================================================

doc/_static/dataset-diagram-logo.svg

@@ -436,7 +436,6 @@ def update_videos(app: Sphinx):
 
     items = []
     for video in videos:
-
         authors = " | ".join(video["authors"])
         item = f"""
 .. grid-item-card:: {" ".join(video["title"].split())}

doc/_static/dataset-diagram-logo.tex

@@ -663,7 +663,6 @@
     "\n",
     "\n",
     "def xr_interp(data, dim, newdim):\n",
-    "\n",
     "    interped = xr.apply_ufunc(\n",
     "        interp1d_np_gufunc,  # first the function\n",
     "        data,  # now arguments in the order expected by 'interp1_np'\n",

doc/conf.py

@@ -15,14 +15,51 @@ What's New
     np.random.seed(123456)
 
 
-.. _whats-new.2023.01.1:
+.. _whats-new.2023.03.0:
 
-v2023.01.1 (unreleased)
+v2023.03.0 (unreleased)
 -----------------------
 
 New Features
 ~~~~~~~~~~~~
 
+- Fix :py:meth:`xr.cov` and :py:meth:`xr.corr` now support complex valued arrays  (:issue:`7340`, :pull:`7392`).
+  By `Michael Niklas <https://github.com/headtr1ck>`_.
+
+Breaking changes
+~~~~~~~~~~~~~~~~
+
+
+Deprecations
+~~~~~~~~~~~~
+
+
+Bug fixes
+~~~~~~~~~
+- Require to explicitly defining optional dimensions such as hue
+  and markersize for scatter plots. (:issue:`7314`, :pull:`7277`).
+  By `Jimmy Westling <https://github.com/illviljan>`_.
+- Fix matplotlib raising a UserWarning when plotting a scatter plot
+  with an unfilled marker (:issue:`7313`, :pull:`7318`).
+  By `Jimmy Westling <https://github.com/illviljan>`_.
+
+Documentation
+~~~~~~~~~~~~~
+
+
+Internal Changes
+~~~~~~~~~~~~~~~~
+
+
+.. _whats-new.2023.02.0:
+
+v2023.02.0 (Feb 7, 2023)
+------------------------
+
+This release brings a major upgrade to :py:func:`xarray.concat`, many bug fixes,
+and a bump in supported dependency versions. Thanks to our 11 contributors:
+Aron Gergely, Deepak Cherian, Illviljan, James Bourbeau, Joe Hamman,
+Justus Magin, Hauke Schulz, Kai Mühlbauer, Ken Mankoff, Spencer Clark, Tom Nicholas.
 
 Breaking changes
 ~~~~~~~~~~~~~~~~
@@ -45,7 +82,10 @@ Breaking changes
 
 Deprecations
 ~~~~~~~~~~~~
-
+- Following pandas, the `closed` parameters of :py:func:`cftime_range` and
+  :py:func:`date_range` are deprecated in favor of the `inclusive` parameters,
+  and will be removed in a future version of xarray (:issue:`6985`:,
+  :pull:`7373`).  By `Spencer Clark <https://github.com/spencerkclark>`_.
 
 Enhancements
 ~~~~~~~~~~~
@@ -55,22 +95,22 @@ Enhancements
 
 Bug fixes
 ~~~~~~~~~
-
 - :py:func:`xarray.concat` can now concatenate variables present in some datasets but
   not others (:issue:`508`, :pull:`7400`).
   By `Kai Mühlbauer <https://github.com/kmuehlbauer>`_ and `Scott Chamberlin <https://github.com/scottcha>`_.
 - Handle ``keep_attrs`` option in binary operators of :py:meth:`Dataset` (:issue:`7390`, :pull:`7391`).
   By `Aron Gergely <https://github.com/arongergely>`_.
+- Improve error message when using dask in :py:func:`apply_ufunc` with ``output_sizes`` not supplied. (:pull:`7509`)
+  By `Tom Nicholas <https://github.com/TomNicholas>`_.
+- :py:func:`xarray.Dataset.to_zarr` now drops variable encodings that have been added by xarray during reading
+  a dataset. (:issue:`7129`, :pull:`7500`).
+  By `Hauke Schulz <https://github.com/observingClouds>`_.
 
 Documentation
 ~~~~~~~~~~~~~
-
 - Mention the `flox package <https://flox.readthedocs.io>`_ in GroupBy documentation and docstrings.
   By `Deepak Cherian <https://github.com/dcherian>`_.
 
-Internal Changes
-~~~~~~~~~~~~~~~~
-
 
 .. _whats-new.2023.01.0:
 

doc/examples/apply_ufunc_vectorize_1d.ipynb

@@ -119,7 +119,6 @@ def open_dataset(
         squeeze=True,
         time_dims=("time", "step"),
     ):
-
         filename_or_obj = _normalize_path(filename_or_obj)
         store = CfGribDataStore(
             filename_or_obj,

doc/whats-new.rst

@@ -401,7 +401,6 @@ def open_dataset(
         phony_dims=None,
         decode_vlen_strings=True,
     ):
-
         filename_or_obj = _normalize_path(filename_or_obj)
         store = H5NetCDFStore.open(
             filename_or_obj,