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412 files changed
+916
-119
lines changed- CMake
- Formatting/templates
- Utilities
- CookieCutter/{{cookiecutter.example_name}}
- src
- Bridge/VtkGlue
- ConvertAnRGBitkImageTovtkImageData
- ConvertAnitkImageTovtkImageData
- ConvertRGBvtkImageDataToAnitkImage
- ConvertvtkImageDataToAnitkImage
- VTKImageToITKImage
- VisualizeEvolvingDense2DLevelSetAsElevationMap
- VisualizeEvolvingDense2DLevelSetZeroSet
- VisualizeStaticDense2DLevelSetAsElevationMap
- VisualizeStaticDense2DLevelSetZeroSet
- VisualizeStaticMalcolm2DLevelSetLayers
- VisualizeStaticShi2DLevelSetLayers
- VisualizeStaticWhitaker2DLevelSetLayers
- Core
- Common
- AddNoiseToBinaryImage
- AddOffsetToIndex
- ApplyAFilterOnlyToASpecifiedRegionOfAnImage
- ApplyCustomOperationToEachPixelInImage
- BoundingBoxOfAPointSet
- BresenhamLine
- BuildAHelloWorldProgram
- CastVectorImageToAnotherType
- CheckIfModuleIsPresent
- ComputeTimeBetweenPoints
- ConceptCheckingIsFloatingPoint
- ConceptCheckingIsSameDimension
- ConceptCheckingIsSameType
- ConvertArrayToImage
- CovariantVectorDotProduct
- CovariantVectorNorm
- CreateABackwardDifferenceOperator
- CreateACovariantVector
- CreateAFixedArray
- CreateAIndex
- CreateAPointSet
- CreateASize
- CreateAVector
- CreateAnImageOfVectors
- CreateAnImageRegion
- CreateAnImage
- CreateAnRGBImage
- CreateAnotherInstanceOfAnImage
- CreateAnother
- CreateDerivativeKernel
- CreateForwardDifferenceKernel
- CreateGaussianDerivativeKernel
- CreateGaussianKernel
- CreateLaplacianKernel
- CreateSobelKernel
- CreateVectorImage
- CropImageBySpecifyingRegion
- DeepCopyImage
- DemonstrateAllOperators
- DirectWarningToFile
- DisplayImage
- DistanceBetweenIndices
- DistanceBetweenPoints
- DoDataParallelThreading
- DuplicateAnImage
- FilterAndParallelizeImageRegion
- FilterImageUsingMultipleThreads
- FilterImageWithoutCopying
- FilterImage
- FindMaxAndMinInImage
- GetImageSize
- GetNameOfClass
- GetOrSetMemberVariableOfITKClass
- GetTypeBasicInformation
- ImageRegionIntersection
- ImageRegionOverlap
- ImportPixelBufferIntoAnImage
- InPlaceFilterOfImage
- IsPixelInsideRegion
- IterateImageStartingAtSeed
- IterateLineThroughImageWithoutWriteAccess
- IterateLineThroughImage
- IterateOnAVectorContainer
- IterateOverARegionWithAShapedNeighborhoodIteratorManual
- IterateOverARegionWithAShapedNeighborhoodIterator
- IterateOverSpecificRegion
- IterateRegionWithAccessToIndexWithWriteAccess
- IterateRegionWithAccessToIndexWithoutWriteAccess
- IterateRegionWithNeighborhood
- IterateRegionWithWriteAccess
- IterateRegionWithoutWriteAccess
- IterateWithNeighborhoodWithoutAccess
- MakeOutOfBoundsPixelsReturnConstValue
- MakePartOfImageTransparent
- MatrixInverse
- Matrix
- MersenneTwisterRandomIntegerGenerator
- MersenneTwisterRandomNumberGenerator
- MiniPipeline
- MultiThreadOilPainting
- MultipleInputsOfDifferentType
- MultipleInputsOfSameType
- MultipleOutputsOfDifferentType
- MultipleOutputsOfSameType
- NeighborhoodIteratorOnVectorImage
- ObserveAnEvent
- PassImageToFunction
- PermuteSequenceOfIndices
- PiConstant
- ProduceImageProgrammatically
- RandomSelectOfPixelsFromRegion
- RandomSelectPixelFromRegionWithoutReplacee
- ReRunPipelineWithChangingLargestPossibleRegion
- ReadAPointSet
- ReadWriteVectorImage
- ReturnObjectFromFunction
- SetDefaultNumberOfThreads
- SetPixelValueInOneImage
- SortITKIndex
- StoreNonPixelDataInImage
- StreamAPipeline
- ThrowException
- TraceMemoryBetweenPoints
- TryCatchException
- UseParallelizeImageRegion
- VariableLengthVector
- VectorDotProduct
- WatchAFilter
- WriteAPointSet
- ImageAdaptors
- AddConstantToPixelsWithoutDuplicatingImage
- ExtractChannelOfImageWithMultipleComponents
- PresentImageAfterOperation
- ProcessNthComponentOfVectorImage
- ViewComponentVectorImageAsScaleImage
- ImageFunction
- ComputeMedianOfImageAtPixel
- LinearlyInterpolatePositionInImage
- MultiplyKernelWithAnImageAtLocation
- ResampleSegmentedImage
- Mesh
- AddPointsAndEdges
- CalculateAreaAndVolumeOfSimplexMesh
- ConvertMeshToUnstructeredGrid
- ConvertTriangleMeshToBinaryImage
- ExtractIsoSurface
- TranslateOneMesh
- WorkingWithPointAndCellData
- WriteMeshToVTP
- QuadEdgeMesh
- CreateTriangularQuadEdgeMesh
- CutMesh
- ExtractVertexOnMeshBoundaries
- GetListOfFacesAroundAGivenVertex
- PrintVertexNeighbors
- SpatialObjects
- Blob
- ContourSpatialObject
- ConvertSpatialObjectToImage
- CreateALineSpatialObject
- Ellipse
- TestKernel/GenerateRandomImage
- Transform
- ApplyAffineTransformFromHomogeneousMatrixAndResample
- CartesianToAzimuthElevation
- CopyACompositeTransform
- CopyANonCompositeTransform
- GlobalRegistrationTwoImagesAffine
- GlobalRegistrationTwoImagesBSpline
- MutualInformationAffine
- ScaleAnImage
- TranslateAVectorImage
- TranslateImage
- Filtering
- AnisotropicSmoothing
- ComputeCurvatureAnisotropicDiffusion
- ComputeCurvatureFlow
- ComputeGradientAnisotropicDiffusion
- ComputePeronaMalikAnisotropicDiffusion
- SmoothImageWhilePreservingEdges2
- SmoothImageWhilePreservingEdges
- AntiAlias/SmoothBinaryImageBeforeSurfaceExtraction
- BinaryMathematicalMorphology
- ClosingBinaryImage
- DilateABinaryImage
- ErodeABinaryImage
- OpeningBinaryImage
- PruneBinaryImage
- ThinImage
- Colormap
- ApplyAColormapToAnImage
- CreateACustomColormap
- MapScalarsIntoJetColormap
- Convolution
- ColorNormalizedCorrelation
- ConvolveImageWithKernel
- NormalizedCorrelationOfMaskedImage
- NormalizedCorrelationUsingFFTWithMaskImages
- NormalizedCorrelationUsingFFT
- NormalizedCorrelation
- CurvatureFlow
- BinaryMinMaxCurvatureFlow
- SmoothImageUsingCurvatureFlow
- SmoothImageUsingMinMaxCurvatureFlow
- SmoothRGBImageUsingCurvatureFlow
- SmoothRGBImageUsingMinMaxCurvatureFlow
- DistanceMap
- ApproxDistanceMapOfBinary
- MaurerDistanceMapOfBinary
- MeanDistanceBetweenAllPointsOnTwoCurves
- SignedDistanceMapOfBinary
- FFT
- ComputeForwardFFT
- ComputeImageSpectralDensity
- ComputeInverseFFTOfImage
- FilterImageInFourierDomain
- FastMarching
- ComputeGeodesicDistanceOnMesh
- CreateDistanceMapFromSeeds
- ImageCompare
- AbsValueOfTwoImages
- CombineTwoImagesWithCheckerBoardPattern
- SquaredDifferenceOfTwoImages
- ImageCompose
- ComposeVectorFromThreeScalarImages
- ConvertRealAndImaginaryToComplexImage
- CreateVectorImageFromScalarImages
- JoinImages
- ImageFeature
- AdditiveGaussianNoiseImageFilter
- ApplyAFilterOnlyToASpecifiedImageRegion
- ApplyAFilterToASpecifiedRegionOfAnImage
- BilateralFilterAnImage
- ComputeLaplacian
- DetectEdgesWithCannyEdgeDetectionFilter
- ExtractContoursFromImage
- FindZeroCrossingsInSignedImage
- LaplacianRecursiveGaussianImageFilter
- SegmentBloodVessels
- SharpenImage
- SobelEdgeDetectionImageFilter
- ZeroCrossingBasedEdgeDecor
- ImageFilterBase
- ApplyKernelToEveryPixelInNonZeroImage
- ApplyKernelToEveryPixel
- CastAnImageToAnotherType
- ComputeLocalNoise
- CustomOperationToCorrespondingPixelsInTwoImages
- PredefinedOperationToCorrespondingPixelsInTwoImages
- ImageFusion
- ColorBoundariesOfRegions
- ColorLabeledRegions
- OverlayLabelMapOnImage
- OverlayLabelMapOnTopOfAnImage
- ImageGradient
- ApplyGradientRecursiveGaussianWithVectorInput
- ApplyGradientRecursiveGaussian
- ComputeAndDisplayGradient
- ComputeGradientMagnitudeRecursiveGaussian
- ComputeGradientMagnitude
- GradientOfVectorImage
- ImplementationOfSnakes
- ImageGrid
- AppendTwo3DVolumes
- ChangeImageOriginSpacingOrDirection
- Create3DVolume
- CropImageBySpecifyingRegion2
- ExtractRegionOfInterestInOneImage
- FitSplineIntoPointSet
- FlipAnImageOverSpecifiedAxes
- PadAnImageByMirroring
- PadAnImageWithAConstant
- PadImageByWrapping
- PasteImageIntoAnotherOne
- PermuteAxesOfAnImage
- ProcessA2DSliceOfA3DImage
- ResampleAScalarImage
- ResampleAVectorImage
- ResampleAnImage
- RunImageFilterOnRegionOfImage
- ShrinkImage
- Stack2DImagesInto3DImage
- TileImagesSideBySide
- UpsampleAnImage
- WarpAnImageUsingADeformationField
- ImageIntensity
- AbsValueOfImage
- AddConstantToEveryPixel
- AddTwoImages
- ApplyAtanImageFilter
- ApplyCosImageFilter
- ApplyExpNegativeImageFilter
- ApplySinImageFilter
- BinaryANDTwoImages
- BinaryORTwoImages
- BinaryXORTwoImages
- CastImageToAnotherTypeButClampToOutput
- CompareTwoImagesAndSetOutputPixelToMax
- CompareTwoImagesAndSetOutputPixelToMin
- ComputeEdgePotential
- ComputeSigmoid
- ComputerMagInVectorImageToMakeMagImage
- ConvertRGBImageToGrayscaleImage
- ExtractComponentOfVectorImage
- IntensityWindowing
- InverseOfMaskToImage
- InvertImage
- MaskImage
- MultiplyImageByScalar
- MultiplyTwoImages
- NormalizeImage
- PixelDivisionOfTwoImages
- RescaleIntensity
- ScalePixelSumToConstant
- SquareEveryPixel
- SubtractConstantFromEveryPixel
- SubtractTwoImages
- TransformVectorValuedImagePixels
- ImageLabel
- ExtractBoundariesOfConnectedRegionsInBinaryImage
- ExtractInnerAndOuterBoundariesOfBlobsInBinaryImage
- LabelContoursOfConnectComponent
- ImageStatistics
- AdaptiveHistogramEqualizationImageFilter
- ApplyAccumulateImageFilter
- ComputeMinMaxVarianceMeanOfImage
- ComputePCAShapeFromSample
- StatisticalPropertiesOfRegions
- LabelMap
- ApplyMorphologicalClosingOnAllLabelObjects
- ApplyMorphologicalClosingOnSpecificLabelObject
- ConvertImageToLabelMap
- ConvertImageWithLabelsToShapeLabelMap
- ConvertLabelMapToImage
- ExtractGivenLabelObject
- InvertImageUsingBinaryNot
- KeepBinaryRegionsThatMeetSpecific
- KeepRegionsAboveLevel
- KeepRegionsThatMeetSpecific
- LabelBinaryRegionsAndGetProperties
- LabelBinaryRegionsInImage
- MaskOneImageGivenLabelMap
- MergeLabelMaps
- RemoveHolesNotConnectedToImageBoundaries
- RemoveLabelsFromLabelMap
- ShapeAttributesForBinaryImage
- MathematicalMorphology
- CreateABinaryBallStructuringElement
- DilateAGrayscaleImage
- ErodeAGrayscaleImage
- ErodeBinaryImageUsingFlatStruct
- GenerateStructureElementsWithAccurateArea
- RegionalMaximal
- RegionalMinimal
- ValuedRegionalMaximaImage
- ValuedRegionalMinimalImage
- Path
- DataStructureForPieceWiseLinearCurve
- ExtractContoursFromImage
- QuadEdgeMeshFiltering
- CleanQuadEdgeMesh
- ComputeNormalsOfAMesh
- ComputePlanarParameterizationOfAMesh
- DelaunayConformEdgeFlipping
- Smoothing
- BlurringAnImageUsingABinomialKernel
- ComputesSmoothingWithGaussianKernel
- FindHigherDerivativesOfImage
- MeanFilteringOfAnImage
- MedianFilteringOfAnImage
- MedianFilteringOfAnRGBImage
- SmoothImageWithDiscreteGaussianFilter
- Thresholding
- DemonstrateThresholdAlgorithms
- SeparateGroundUsingOtsu
- ThresholdAnImageUsingBinary
- ThresholdAnImageUsingOtsu
- ThresholdAnImage
- IO
- GDCM
- ReadAndPrintDICOMTags
- ReadDICOMSeriesAndWrite3DImage
- ResampleDICOMSeries
- ImageBase
- ConvertFileFormats
- ConvertImageToAnotherType
- Create3DFromSeriesOf2D
- CreateAListOfFileNames
- GenerateSlicesFromVolume
- ProcessImageChunks
- ReadAnImage
- ReadUnknownImageType
- RegisterIOFactories
- WriteAnImage
- Mesh/ReadMesh
- TIFF/WriteATIFFImage
- TransformBase
- ReadTransformFromFile
- WriteTransformToFile
- TransformFactory/RegisterTransformWithTransformFactory
- Nonunit/Review
- GeometricPropertiesOfRegion
- MultiphaseChanAndVeseSparseFieldLevelSetSegmentation
- SegmentBloodVesselsWithMultiScaleHessianBasedMeasure
- SinglephaseChanAndVeseDenseFieldLevelSetSegmentation
- SinglephaseChanAndVeseSparseFieldLevelSetSegmentation
- Numerics
- Optimizers
- AmoebaOptimizer
- ExhaustiveOptimizer
- LevenbergMarquardtOptimization
- Statistics
- 2DGaussianMixtureModelExpectMax
- ComputeHistogramFromGrayscaleImage
- ComputeHistogramOfMaskedRegion
- ComputeTextureFeatures
- CreateGaussianDistribution
- CreateHistogramFromListOfMeasurements
- CreateListOfSampleMeasurements
- CreateListOfSamplesFromImageWithoutDuplication
- CreateListOfSamplesWithIDs
- DistributeSamplingUsingGMM
- DistributionOfPixelsUsingGMM
- HistogramCreationAndBinAccess
- SpatialSearch
- Registration
- Common
- ComputeMeanSquareBetweenTwoImages
- GlobalRegistrationOfTwoImages
- MatchFeaturePoints
- MultiresolutionPyramidFromImage
- MutualInformation
- Perform2DTranslationRegistrationWithMeanSquares
- PerformMultiModalityRegistrationWithMutualInformation
- RegisterImageToAnotherUsingLandmarks
- WatchRegistration
- Metricsv4
- PerformRegistrationOnVectorImages
- RegisterTwoPointSets
- Remote/WikiExamples
- CustomUserMatrixToAlignImageWithDICOM
- DisplayITKImage
- Segmentation
- Classifiers
- ClusterPixelsInGrayscaleImage
- KMeansClusterOfPixelsInImage
- KMeansClustering
- ConnectedComponents
- AssignContiguousLabelsToConnectedRegions
- ExtraLargestConnectComponentFromBinaryImage
- LabelConnectComponentsInBinaryImage
- LabelConnectComponentsInGrayscaleImage
- KLMRegionGrowing/BasicRegionGrowing
- LabelVoting/IterativeHoleFilling
- LevelSets/SegmentWithGeodesicActiveContourLevelSet
- RegionGrowing
- ConnectedComponentsInImage
- SegmentPixelsWithSimilarStats
- Voronoi/VoronoiDiagram
- Watersheds
- MorphologicalWatershedSegmentation
- SegmentWithWatershedImageFilter
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