@@ -12,42 +12,6 @@ recommend you to follow the guide for installation of CUDA 11.4 (deb
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(local))
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- Matlab
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- -------
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-
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- Xmipp has a binding to MATLAB, which allows the user to run specific
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- Xmipp functions inside MATLAB.
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-
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- Previous requirements
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- ^^^^^^^^^^^^
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-
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- It is required to have a regular MATLAB installation.
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-
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- Settings
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- ^^^^^^^^^^^^^^^^^^^^
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-
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- Make sure you have these settings in your Xmipp configuration file
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- (``xmipp-bundle/xmipp.conf ``) before compiling Xmipp:
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-
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- ``MATLAB=True ``
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-
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- ``MATLAB_DIR=<path to your MATLAB instalation> `` (usually something
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- like: ``MATLAB_DIR=/home/user/MATLAB/R2021b ``)
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-
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- Run
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- ^^^^^^^^^^^^^^^^^^^^
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-
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- 1. Compile Xmipp normally (once the settings are as above): ``./xmipp ``
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- or ``scipion run ./xmipp ``
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- 2. Open MATLAB
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- 3. In MATLAB, set the path to Xmipp binding:
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- ``HOME > Set Path > Add Folder... `` and select the path to the
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- binding (``<path to xmipp>/xmipp-bundle/build/bindings/matlab ``),
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- then, click in ``Open `` and ``Save ``
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- 4. Now you should be able to run functions like ``xmipp_read() `` in
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- MATLAB
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-
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-
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DeepLearningToolkit
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---------------------
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@@ -144,3 +108,40 @@ Program using this environment:* `tomogram_reconstruction`
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- numpy
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- tigre
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+
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+
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+ Matlab
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+ -------
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+
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+ Xmipp has a binding to MATLAB, which allows the user to run specific
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+ Xmipp functions inside MATLAB.
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+
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+ Previous requirements
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+ ^^^^^^^^^^^^
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+
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+ It is required to have a regular MATLAB installation.
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+
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+ Settings
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+ ^^^^^^^^^^^^^^^^^^^^
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+
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+ Make sure you have these settings in your Xmipp configuration file
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+ (``xmipp-bundle/xmipp.conf ``) before compiling Xmipp:
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+
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+ ``MATLAB=True ``
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+
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+ ``MATLAB_DIR=<path to your MATLAB instalation> `` (usually something
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+ like: ``MATLAB_DIR=/home/user/MATLAB/R2021b ``)
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+
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+ Run
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+ ^^^^^^^^^^^^^^^^^^^^
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+
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+ 1. Compile Xmipp normally (once the settings are as above): ``./xmipp ``
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+ or ``scipion run ./xmipp ``
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+ 2. Open MATLAB
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+ 3. In MATLAB, set the path to Xmipp binding:
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+ ``HOME > Set Path > Add Folder... `` and select the path to the
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+ binding (``<path to xmipp>/xmipp-bundle/build/bindings/matlab ``),
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+ then, click in ``Open `` and ``Save ``
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+ 4. Now you should be able to run functions like ``xmipp_read() `` in
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+ MATLAB
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+
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