Total_score #9
Description
Appreciate your work!
I have an A_B protein complex generated by the AlphaFold3 (AF3) Server. I renamed the output files as P.pdb and native.pdb. Then, I ran the command mpiexec -np 20 rosetta_scripts.mpi.linuxgccrelease @flags_replica_dock. However, I noticed a total_score of -2000 in the scores.sc file. Is this normal?
Also, is AF3 generally better than AFm v2.3 for predicting protein complexes?