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Merge pull request #236 from ELIXIR-Belgium/na-fix
Make sure NA as registry value is not displayed
2 parents 180e5e2 + 1ffbd5f commit 21647f4

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+22
-20
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+22
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‎Gemfile

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source "https://rubygems.org"
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gem "elixir-toolkit-theme-plugins", "~> 0.1.9"
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gem "elixir-toolkit-theme-plugins", "~> 0.1.10"
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gem "webrick", "~> 1.8.1"
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gem "jekyll", "~> 4.3.2"
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gem "jemoji", "~> 0.13.0"

‎Gemfile.lock

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addressable (2.8.6)
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public_suffix (>= 2.0.2, < 6.0)
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base64 (0.2.0)
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bigdecimal (3.1.6)
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bigdecimal (3.1.7)
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colorator (1.1.0)
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concurrent-ruby (1.2.3)
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connection_pool (2.4.1)
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drb (2.2.1)
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elixir-toolkit-theme-plugins (0.1.9)
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elixir-toolkit-theme-plugins (0.1.10)
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jekyll (~> 4.3, >= 4.3.1)
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em-websocket (0.5.3)
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eventmachine (>= 0.12.9)
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activesupport (>= 2)
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nokogiri (>= 1.4)
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http_parser.rb (0.8.0)
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i18n (1.14.1)
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i18n (1.14.4)
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concurrent-ruby (~> 1.0)
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jekyll (4.3.3)
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addressable (~> 2.4)
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rb-fsevent (~> 0.10, >= 0.10.3)
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rb-inotify (~> 0.9, >= 0.9.10)
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mercenary (0.4.0)
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minitest (5.22.2)
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minitest (5.22.3)
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mutex_m (0.2.0)
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net-http (0.4.1)
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uri
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nokogiri (1.16.2-x86_64-linux)
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nokogiri (1.16.3-x86_64-linux)
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racc (~> 1.4)
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octokit (6.1.1)
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faraday (>= 1, < 3)
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rb-inotify (0.10.1)
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ffi (~> 1.0)
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rexml (3.2.6)
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rouge (4.2.0)
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rouge (4.2.1)
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rubyzip (2.3.2)
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safe_yaml (1.0.5)
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sass-embedded (1.69.5)
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x86_64-linux
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DEPENDENCIES
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elixir-toolkit-theme-plugins (~> 0.1.9)
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elixir-toolkit-theme-plugins (~> 0.1.10)
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jekyll (~> 4.3.2)
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jekyll-github-metadata (~> 2.16.0)
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jekyll-redirect-from (~> 0.16.0)

‎_data/tool_and_resource_list.yml

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registry:
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fairsharing: wy4egf
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tess: Zenodo
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biotools: NA
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- description:
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API framework and data model for cross-cohort searching.
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url: https://github.com/ga4gh-beacon/beacon-v2

‎_includes/resource-table-all.html

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{%- for tag in tool.related_pages %}
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{%- unless tag == page.page_id %}
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{%- assign related_page = site.pages | where:"page_id",tag | first %}
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<a href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize}}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
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<a href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize }}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
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{%- endunless %}
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{%- endfor %}
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{%- endcapture %}
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<td>{{related_pages}}</td>
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<td>
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{%- if tool.registry.biotools %}
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{%- if tool.registry.biotools and tool.registry.biotools != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="Bio.tools" href="https://bio.tools/{{tool.registry.biotools}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-info me-2"></i>Tool info</span></a>
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{%- endif %}
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{%- if tool.registry.fairsharing %}
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{%- if tool.registry.fairsharing and tool.registry.fairsharing != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing" href="https://fairsharing.org/FAIRsharing.{{tool.registry.fairsharing}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
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{%- endif %}
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{%- if tool.registry.fairsharing-coll %}
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{%- if tool.registry.fairsharing-coll and tool.registry.fairsharing-coll != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing collection" href="https://fairsharing.org/{{tool.registry.fairsharing-coll}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
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{%- endif %}
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{%- if tool.registry.tess %}
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{%- if tool.registry.tess and tool.registry.tess != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="TeSS" href="https://tess.elixir-europe.org/search?q={{tool.registry.tess}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-graduation-cap me-2"></i>Training</span></a>
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{%- endif %}
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{%- if tool.registry.europmc %}
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{%- if tool.registry.europmc and tool.registry.europmc != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="EuroPMC" href="https://europepmc.org/article/MED/{{tool.registry.europmc}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-book me-2"></i>Publication</span></a>
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{%- endif %}
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</td>
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{%- for tag in section[1] %}
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{%- unless tag == page.page_id %}
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{%- assign related_page = site.pages | where:"page_id",tag | first %}
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<a class="nohover" href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize}}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
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<a class="nohover" href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize }}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
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{%- endunless %}
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{%- endfor %}
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{%- endunless %}
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<td></td>
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{%- endif %}
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<td>
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{%- if tool.registry.biotools %}
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{%- if tool.registry.biotools and tool.registry.biotools != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="Bio.tools" href="https://bio.tools/{{tool.registry.biotools}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-info me-2"></i>Tool info</span></a>
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{%- endif %}
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{%- if tool.registry.fairsharing %}
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{%- if tool.registry.fairsharing and tool.registry.fairsharing != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing" href="https://fairsharing.org/FAIRsharing.{{tool.registry.fairsharing}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
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{%- endif %}
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{%- if tool.registry.fairsharing-coll %}
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{%- if tool.registry.fairsharing-coll and tool.registry.fairsharing-coll != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing collection" href="https://fairsharing.org/{{tool.registry.fairsharing-coll}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
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{%- endif %}
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{%- if tool.registry.tess %}
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{%- if tool.registry.tess and tool.registry.tess != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="TeSS" href="https://tess.elixir-europe.org/search?q={{tool.registry.tess}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-graduation-cap me-2"></i>Training</span></a>
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{%- endif %}
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{%- if tool.registry.europmc %}
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{%- if tool.registry.europmc and tool.registry.europmc != "NA" %}
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<a data-bs-toggle="tooltip" data-bs-original-title="EuroPMC" href="https://europepmc.org/article/MED/{{tool.registry.europmc}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-book me-2"></i>Publication</span></a>
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{%- endif %}
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</td>

‎pages/documentation/resource_table.md

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tess: GitHub
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```
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{% include callout.html type="tip" content="`NA` as registry value will not be rendered as a url but will be skipped." %}
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## What tool or resource can be added to the table
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Tools and resources specifically mentioned in the text of the pages should be present in the main table.

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