Skip to content

Commit 1eacd08

Browse files
authored
Update README.md
1 parent f324d38 commit 1eacd08

File tree

1 file changed

+5
-5
lines changed

1 file changed

+5
-5
lines changed

README.md

Lines changed: 5 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -9,7 +9,7 @@ for GENOmics
99
With figeno, you can plot various types of sequencing data along genomic coordinates. Video overview: https://www.youtube.com/watch?v=h1cBeXoSYTA.
1010

1111
![figeno](docs/content/images/figeno.png)
12-
Example figures generated with figeno. Left: allele-specific methylation with nanopore data. Right: HiC data across a structural rearrangement. See more examples [here](https://figeno.readthedocs.io/en/latest/content/examples.html)
12+
Example figures generated with figeno. Left: allele-specific methylation with nanopore data. Right: HiC data across a structural rearrangement. See more examples [here](https://figeno.readthedocs.io/en/latest/content/examples.html).
1313

1414
## Features
1515
- Large collection of tracks (bigwig, HiC, alignments with base modifications, WGS with copy numbers and SV…)
@@ -30,8 +30,8 @@ This will install figeno and run the graphical user interface (GUI). From the GU
3030
Download figeno_windows.zip from https://github.com/CompEpigen/figeno/releases/latest, unzip it and launch the graphical user interface by executing `figeno.exe`.
3131

3232
## Documentation
33-
For more information on how to use figeno, please read the documentation at:
34-
https://figeno.readthedocs.io/en/latest/
33+
For more information on how to use figeno, please read the documentation at
34+
https://figeno.readthedocs.io/en/latest/.
3535

3636
## Test data
3737
Example input files to test figeno are provided in [test_data](https://github.com/CompEpigen/figeno/tree/main/test_data).
@@ -40,7 +40,7 @@ Example input files to test figeno are provided in [test_data](https://github.co
4040
If you encounter a bug or would like to have a new feature added, please do not hesitate to [raise an issue](https://github.com/CompEpigen/figeno/issues/new) or to [contact me directly](https://www.dkfz.de/en/CanEpi/staff/kontakt/Sollier_Etienne.php). You can also provide feedback by completing this [anonymous form](https://forms.gle/xb9Ygk6zsJCJUQYm9), which would help me improve figeno!
4141

4242
## Citation
43-
If you use figeno in your research, we would appreciate it if you would cite the manuscript describing figeno:
43+
If you use figeno in your research, please consider citing:
4444

45-
Etienne Sollier, Jessica Heilmann, Clarissa Gerhauser, Michael Scherer, Christoph Plass, Pavlo Lutsik. Figeno: multi-region genomic figures with long-read support. [doi:10.1101/2024.04.22.590500](https://doi.org/10.1101/2024.04.22.590500).
45+
Etienne Sollier, Jessica Heilmann, Clarissa Gerhauser, Michael Scherer, Christoph Plass, Pavlo Lutsik. Figeno: multi-region genomic figures with long-read support, Bioinformatics 2024. [https://doi.org/10.1093/bioadv/vbae031](https://doi.org/10.1093/bioadv/vbae031)
4646

0 commit comments

Comments
 (0)