v0.95.22

Oceananigans v0.95.22

Diff since v0.95.21

Merged pull requests:

• Bugfix in distributed fill halos (#3714) (@simone-silvestri)
• Fix the docstring for ImmersedBoundaryGrid (#4174) (@glwagner)
• Add non-trivial default boundary conditions for FieldTimeSeries (#4185) (@glwagner)
• (0.95.22) bump minor version (#4188) (@simone-silvestri)

v0.95.21

Oceananigans v0.95.21

Diff since v0.95.20

Merged pull requests:

• Lagrangian Smagorinsky for 2D flows (#4009) (@simone-silvestri)
• Set a default Clock depending on the grid (#4096) (@glwagner)
• Expose tridiagonal_direction as kwarg for FourierTridiagonalPoissonSolver (#4169) (@glwagner)
• Improve definition of @apply_regionally (#4178) (@giordano)
• Add "_rank0", "_rank1" etc to output prefix on distributed architectures (#4179) (@glwagner)
• Adds viscosity(model) method and similarly for diffusivity (#4180) (@tomchor)

Closed issues:

• DynamicSmagorinsky is very slow using default arguments and sometimes produces NaNs (#4069)

v0.95.20

Oceananigans v0.95.20

Diff since v0.95.18

Merged pull requests:

• Add support for ZStar in RK3 (#4156) (@simone-silvestri)
• Formatting of the store_*! functions (#4164) (@simone-silvestri)
• Maybe fixes a bug for interpolating FieldTimeSeries (#4168) (@glwagner)
• Remove if-statement from tridiagonal solver sweep (#4170) (@glwagner)
• Bump to 0.95.20 (#4171) (@glwagner)
• Clean up diffusivity fields for CATKE and TKEDissipation (#4173) (@glwagner)
• Add explicit constructors for the timesteppers (#4175) (@simone-silvestri)
• Fix wrong default in ReactantExt for ImmersedBoundaryGrid (#4177) (@glwagner)

v0.95.18

Oceananigans v0.95.18

Diff since v0.95.17

Merged pull requests:

• Clean up immersed boundary interface (#4140) (@simone-silvestri)
• Update spatial_operators.md (#4153) (@briochemc)
• Clean up of active map utils (#4160) (@glwagner)
• Bump to 0.95.18 (#4163) (@glwagner)

v0.95.17

Oceananigans v0.95.17

Diff since v0.95.16

Merged pull requests:

• Add method to maximum_numeric_diffusivity for DiscreteDiffusionFunction (#4101) (@jbisits)
• Add more UnaryOperations with @unary (#4142) (@glwagner)
• Really try to make sure that Metal is being used in test_metal.jl (#4152) (@glwagner)
• Fix reconstruct_global_grid (#4157) (@glwagner)
• Bump to 0.95.17 (#4159) (@glwagner)

Closed issues:

• maximum_numeric_diffusivity not defined for DiscreteDiffusionFunction (#4094)
• Extend list of unary operators? (#4130)

v0.95.16

Oceananigans v0.95.16

Diff since v0.95.15

Merged pull requests:

• (0.95.15) Fix bugs in ReactantExt for OrthogonalSphericalShellGrid (#4151) (@glwagner)
• Bump to 0.95.16 (#4155) (@glwagner)

v0.95.15

Oceananigans v0.95.15

Diff since v0.95.14

Merged pull requests:

• Expanded interpolation utilities (#4146) (@glwagner)
• Implement time_step!(sim::Simulation, Δt) (#4148) (@glwagner)
• New reactant feature: sharding + avoid direct usage of RArray (#4150) (@avik-pal)
• Bump to 0.95.15 (#4154) (@glwagner)

v0.95.14

Oceananigans v0.95.14

Diff since v0.95.13

Merged pull requests:

• Adds a pertubation advection open boundary matching scheme (#3977) (@jagoosw)
• More README info about citing and model development papers (#4125) (@glwagner)
• Remove wrong statements from README about parallelization (#4147) (@glwagner)
• Bump to 0.95.14 (#4149) (@glwagner)

Closed issues:

• Add support for MtlArrays? (#2618)
• Performance benchmarks section of the README wrongly says we don't support Distributed (#3758)
• Is it important that we skip the first time-step? (#4002)
• Bugs when indexing a partly in memory FieldTimeSeries (#4077)

v0.95.13

Oceananigans v0.95.13

Diff since v0.95.12

Merged pull requests:

• Fix some FieldTimeSeries bugs (#4086) (@simone-silvestri)
• Implement RotatedLatitudeLongitudeGrid (#4108) (@glwagner)
• Add warning for Julia version >= v1.11 (#4109) (@navidcy)
• (0.95.13) Use active-weighted rather than naive reconstruction for f- and beta-plane Coriolis terms (#4112) (@glwagner)
• Add finalize! for callbacks (#4116) (@glwagner)
• CompatHelper: add new compat entry for StaticArrays at version 1, (keep existing compat) (#4122) (@github-actions[bot])
• Add option to turn off time-step alignment (#4123) (@glwagner)
• Generalize GPU backend and add Metal extension (#4124) (@glwagner)
• Avoid concretizing grid data when it does not need to be traced (#4135) (@glwagner)
• Implement InterpolationIndices for time-interpolating FieldTimeSeries (#4136) (@glwagner)
• Bump to 0.95.14 (#4138) (@glwagner)
• Bump down to 0.95.13 (#4145) (@glwagner)

Closed issues:

• Issue with Noise In Vorticity on Cartesian Grid with Immersed Bottom Boundary (#4111)
• "KernelAbstractions" not found error and extensions possibly not working (#4120)
• Velocity Divergence Issues with Anisotropic Grid in Immersed Boundary Implementation (#4129)
• Buildkite logs are no longer visible to people outside of the buildkite organisation (#4132)

v0.95.12

Oceananigans v0.95.12

Diff since v0.95.11

Merged pull requests:

• Make the OceananigansReactantExt depend explicitly on KA (#4093) (@glwagner)
• Allow schedules to use different float types (#4097) (@glwagner)
• Fix the title of the internal tide example (#4103) (@glwagner)
• Remove warning for ImmersedBoundaryCondition (#4106) (@glwagner)