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In load_module_text(), the module loaded is anaconda/5.0.1, which is no longer available on Eddie. Probably the best substitute is miniforge/24.7.1, but this could also change in the future. Maybe it's possible to make this configurable?
The same function is also hard-coded to load a conda environment called cellprofiler
, but what if the user's environment is named differently, or keeps different versions of CellProfiler? Maybe we can default to cellprofiler
, and override it if needed in the experiment yaml.
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