Issue loading some spectra. #3
Description
I am finding quite a lot of errors like these:
out of range errors:
terminate called after throwing an instance of 'std::out_of_range'
what(): vector::_M_range_check: __n (which is 10000) >= this->size() (which is 10000)
Aborted (core dumped)
terminate called after throwing an instance of 'std::out_of_range'
free(): invalid size
Aborted (core dumped)
in addition; I have found that I am not able to set the number of iterations using the -i flag
.../msCRUSH/bin$ ./mscrush_on_general_charge -f test.mgf -c .../default_settings -i 2000
--Output HyperParams Begins--
<bool> peak intensity log normalized: Yes
<bool> remove precursor peak: Yes
<float> precursor mass tolerance(Da): 0.05
<float> max peak mz: 2000
<float> min peak mz: 200
<float> min cosine sim for clustering: 0.65
<float> mz scale after nomrlization: 1000
<float> fragment precision: 0.8
<float> shared peak mz eps: 0.2
<int> clustering iteration: 100
<int> hash functions per hash table: 15
<int> hash function dimension: 2251
<int> topK strongest peaks per bin: 5
<int> threads to use: 20
<int> window(bin) size: 100
<string> consensus spectra file prefix: consensus
<string> clustering result file prefix: .../default_settings
--Output HyperParams Ends--
This is on Windows subsystem Linux, where I have been able to run the clustering algorithm and consnsus file generation for other files. Do you have any idea what the problem is?