-
Notifications
You must be signed in to change notification settings - Fork 3
Open
Labels
bugSomething isn't workingSomething isn't working
Description
We can use species_list_uid
in galah_filter()
to return only information for species and subspecies on a specific list. For example, here we can filter to species on the EPBC list.
library(galah)
# Filter to species on EPBC list
galah_call() |>
filter(species_list_uid == "dr656") |>
atlas_counts()
#> # A tibble: 1 × 1
#> count
#> <int>
#> 1 3525524
However, it doesn't seem to work for all lists. This list is a user list of all tree species and can be found on galah. Yet when used in filter()
returns no results.
# List exists on ALA
search_all(lists, "dr31947") |>
show_values()
#> • Showing values for 'dr31947'.
#> # A tibble: 3,597 × 6
#> id name scientificName lsid dataResourceUid commonName
#> <int> <chr> <chr> <chr> <chr> <chr>
#> 1 6819806 Abroma molle Abroma molle http… dr31947 <NA>
#> 2 6819807 Abrophyllum ornans Abrophyllum o… http… dr31947 Native Hy…
#> 3 6819808 Acacia acuminata Acacia acumin… http… dr31947 Raspberry…
#> 4 6819809 Acacia ammobia Acacia ammobia http… dr31947 Mt Conner…
#> 5 6819810 Acacia ammophila Acacia ammoph… http… dr31947 <NA>
#> 6 6819811 Acacia anastema Acacia anaste… http… dr31947 <NA>
#> 7 6819812 Acacia anaticeps Acacia anatic… http… dr31947 Duck-head…
#> 8 6819813 Acacia aneura Acacia aneura http… dr31947 Broad-lea…
#> 9 6819814 Acacia aneura var. a… Acacia aneura… http… dr31947 Mulga
#> 10 6819815 Acacia aneura var. m… Acacia aneura… http… dr31947 <NA>
#> # ℹ 3,587 more rows
# Returns nothing
galah_call() |>
filter(species_list_uid == "dr31947") |>
atlas_counts()
#> # A tibble: 1 × 1
#> count
#> <int>
#> 1 0
Created on 2025-07-11 with reprex v2.1.1
Do lists have to be authoritative to work with filter()
? Is this list structured differently so that filter()
isn't matching results correctly?
Metadata
Metadata
Assignees
Labels
bugSomething isn't workingSomething isn't working